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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'
  2. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2.g00043.01.t

Possible name(s)

EFNA1; EFNB1; EFNB2

Location

S2 [184,144 / 191,428]

Sequences

Amino acid sequence

Length: 263

>Phfumi.CG.MTP2014.S2.g00043.01.p
MSRTFVFWIALSLVFAQVTCSSSRPRHEVYWNTYASPKLLVENYDEFVLHVKIGEFLDIL
CPQRSLMGITNGPKEPALFNLYNVTKENYLKCHHGDKKGKNFIFACNKPERENKLTIKFQ
TISPSPLGFRFQYCAEYYFVALSNYHENPGCIKNSTRIRIVVQCKDKPRPTKTPQKTNTT
TTLPRTTIKSTTQRKTDDPPFVHPPLQRPTKNASVLFTGAQKQQKPKEHNDGRGACGHVM
PSLWRILTFSFSALTVTNIVRQA

Nucleotide sequence

Length: 789

>Phfumi.CG.MTP2014.S2.g00043.01.t
ATGAGTCGAACATTTGTGTTTTGGATTGCTTTGTCGTTGGTCTTTGCACAAGTTACTTGT
TCTTCATCACGCCCACGCCACGAGGTGTATTGGAACACATACGCATCACCAAAGCTTCTG
GTGGAAAATTACGACGAATTCGTACTTCACGTTAAAATTGGGGAGTTTCTTGACATTCTT
TGTCCTCAACGAAGTCTAATGGGTATCACAAACGGTCCGAAAGAACCTGCCCTATTCAAC
CTATACAACGTCACCAAGGAAAATTATCTCAAATGCCACCACGGAGACAAGAAAGGCAAG
AACTTTATATTTGCGTGCAACAAACCGGAGAGAGAAAACAAGCTGACAATCAAGTTCCAA
ACTATCAGCCCTTCCCCTCTCGGCTTTCGTTTCCAATATTGCGCGGAATATTATTTTGTT
GCCCTGAGCAATTACCACGAGAATCCGGGGTGTATCAAAAACTCAACGAGAATAAGAATT
GTTGTACAATGCAAAGACAAACCCCGACCGACTAAAACACCCCAAAAGACGAATACTACG
ACGACGCTTCCAAGAACCACGATAAAGTCAACGACACAAAGGAAAACGGACGATCCGCCG
TTTGTGCATCCACCACTGCAAAGACCCACCAAAAACGCATCAGTTTTGTTCACTGGCGCC
CAAAAGCAGCAGAAACCAAAAGAACACAATGATGGACGTGGCGCTTGCGGCCATGTTATG
CCATCGTTATGGCGAATACTGACATTTTCCTTTTCCGCTTTAACAGTAACTAACATTGTA
AGGCAAGCG

InterProScan

PANTHER
Ephrin (IPR031328) - T[9-228] 1.1E-71
Gene3D
Cupredoxin (IPR008972) - T[20-177] 4.1E-31
ProSiteProfiles
Ephrin_RBD (IPR001799) - T[24-162] 41.072
SUPERFAMILY
Cupredoxin (IPR008972) - T[25-167] 1.46E-32
Pfam
Ephrin_RBD (IPR001799) - T[26-162] 7.6E-30
ProDom
Ephrin_RBD (IPR001799) - T[48-144] 2.0E-11
PRINTS
Ephrin_RBD (IPR001799) - T[48-65] 1.1E-9 - T[77-92] 1.1E-9 - T[114-126] 1.1E-9 - T[127-138] 1.1E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value