Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S3085.g05416.01.t

Possible name(s)

TRMT1; TRMT1L

Gene model

Phfumi.CG.MTP2014.S3085.g05416

Location

S3085 [2,483 / 3,797]

Sequences

Amino acid sequence

Length: 437

>Phfumi.CG.MTP2014.S3085.g05416.01.p
MSCTEVNSTEHGVSYQTVGPIQTAITSKRVSKILELNISRAIALCCVKLLADETTGTMSV
LDAVNAFALPGSQWVKHINEGIKVTTNVANELQNDICLRNKDVHQMEVVAEDPHVLMHSR
KFKFIYIEAVGSAVTYLDAALRSVNHEGLLCVTSTDIAILNNKSPDTAVRLYGAKLLKSE
YWGEMAVRVIVANALKAAGRWGKGVVVKMCAVTEFSVTVVFRVLRGAKHVEPHLSLLQSL
SHCMNCQARAFNEDSSQILLPNEPLCECGDNSTLSAVTQLGPMWSGSIFSPRFVQKLLKQ
ATDFKLPESVVKTFQLLLIESICCKTESEEKVLFCLSEDTARSQDGPPLKKLKCDEESIA
IEIDEVQPAPLFYFDFQHHSVKGGNPPKLLTVVERLRQLGHRASKTHFGPRCVRTSATLH
QFNDLLKQMWDEISKTT

Nucleotide sequence

Length: 1,314

>Phfumi.CG.MTP2014.S3085.g05416.01.t
ATGAGCTGCACGGAAGTTAATTCAACTGAACATGGAGTTTCCTATCAAACTGTGGGACCC
ATTCAAACAGCAATAACCTCGAAACGAGTTTCAAAAATCTTGGAATTGAACATAAGCAGG
GCAATAGCACTGTGTTGTGTAAAGTTGCTTGCAGATGAAACAACAGGCACAATGTCAGTT
TTGGACGCTGTAAATGCATTTGCTTTGCCAGGATCTCAATGGGTTAAGCATATAAATGAA
GGTATTAAAGTAACAACAAATGTGGCAAATGAGTTGCAAAATGATATCTGTCTTCGGAAC
AAAGATGTCCATCAGATGGAAGTAGTAGCAGAGGATCCACATGTTCTCATGCACAGCAGA
AAATTCAAGTTCATCTATATTGAAGCAGTGGGTTCTGCAGTGACCTACCTTGATGCTGCC
TTGCGCTCAGTAAATCATGAAGGTTTATTATGTGTCACAAGCACTGACATTGCAATCCTC
AACAACAAATCCCCGGACACTGCTGTGAGGCTTTATGGTGCTAAGCTTCTAAAGAGTGAA
TATTGGGGAGAGATGGCGGTTAGAGTGATTGTTGCCAATGCTCTTAAAGCTGCCGGACGA
TGGGGTAAAGGAGTTGTGGTAAAGATGTGTGCTGTAACAGAGTTTAGTGTGACTGTAGTT
TTCCGTGTTTTAAGGGGTGCAAAACATGTTGAACCCCACCTTTCACTGTTGCAATCACTG
TCACATTGTATGAATTGCCAAGCACGAGCATTCAACGAAGATTCTTCACAAATATTGTTA
CCAAATGAGCCATTGTGTGAATGTGGTGACAACAGCACATTGTCGGCAGTGACTCAACTG
GGCCCCATGTGGTCAGGTAGCATTTTTAGTCCCAGATTTGTGCAGAAGCTACTGAAGCAA
GCAACAGATTTTAAATTACCCGAGAGCGTTGTAAAAACTTTTCAATTGCTGCTAATTGAG
AGCATTTGCTGCAAAACTGAATCGGAAGAAAAAGTGCTGTTTTGTTTGTCAGAGGATACT
GCTAGAAGCCAAGATGGGCCTCCGTTAAAAAAATTGAAGTGTGATGAAGAGAGTATTGCA
ATAGAGATTGATGAGGTACAACCTGCACCACTGTTCTATTTTGACTTTCAGCATCACAGT
GTAAAGGGTGGCAATCCACCCAAACTGTTGACAGTTGTTGAAAGACTGCGTCAACTTGGA
CACAGAGCTAGCAAAACACATTTTGGCCCACGCTGTGTAAGAACATCTGCAACTTTGCAT
CAGTTTAATGATCTTCTGAAACAAATGTGGGATGAAATTTCAAAGACAACTTAG

InterProScan

ProSiteProfiles	Trm1 (IPR002905) - T[1-426] 47.823
Pfam	Trm1 (IPR002905) - T[40-333] 9.6E-39 - T[364-426] 2.0E-6
SUPERFAMILY	SAM-dependent_MTases (IPR029063) - T[46-427] 1.01E-46
PANTHER	Trm1 (IPR002905) - T[99-428] 2.1E-82

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TRM1L_HUMAN	31.651 %	173	2.11E-47
TRM1_HUMAN	30.189 %	92	6.63E-20