- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3182.g05509.03.t
Possible name(s)
C6; C8A; C8B
Gene model
Location
S3182 [4,945 / 14,579]
Amino acid sequence
Length: 329
>Phfumi.CG.MTP2014.S3182.g05509.03.p
CTTEITCVRDTLACNGDDDCTDHSDELHCDDIFSPCSTPKDRIPSVDVVGAAFNILRNEE
TGTILDNWRYDGRCTIVTSGDHDGQEFRQPANILSYRFQAKADTTFFMNSYACTKNFIQE
EREEQQNRMELGFSFIFLSSKVAYSSDSKRTTIIENGSKMDSKYFKTRSRIEVAQFRTLR
NNLFTTYLFRRREAELPERFDYAEYSKIITDFGTHYYSSGVLGGEFETIYRYDRSELTES
TLTEEEQKHCLENEIFSIKSEKCSTNALSQRYDGSFIGAAKDVVVTVKGGSSDTAASLSF
SQQETPSKEDFDAWAATVKDNPAVVDFMV
Nucleotide sequence
Length: 987
>Phfumi.CG.MTP2014.S3182.g05509.03.t
TGCACGACAGAAATAACTTGTGTTCGAGACACTCTGGCCTGCAACGGGGACGACGACTGC
ACTGATCATTCGGACGAACTGCACTGCGACGACATATTTAGTCCTTGTAGTACGCCCAAA
GACCGAATTCCAAGTGTTGACGTTGTTGGGGCTGCATTCAACATATTGCGAAATGAAGAG
ACAGGGACCATTCTGGACAACTGGCGATACGATGGAAGGTGCACGATTGTCACCAGCGGT
GATCACGACGGTCAGGAATTTCGTCAGCCGGCTAACATTTTGTCCTACCGGTTTCAGGCA
AAAGCGGACACCACATTTTTCATGAATTCATACGCATGCACCAAGAACTTTATACAAGAG
GAGAGAGAGGAACAACAAAACAGGATGGAACTTGGATTTTCATTTATCTTCTTGAGCTCG
AAGGTAGCTTACAGTTCCGACTCCAAAAGGACAACCATTATCGAGAATGGCAGTAAAATG
GATTCAAAGTATTTCAAAACACGAAGCAGAATCGAAGTTGCACAATTCAGGACCCTTCGA
AACAATCTCTTTACAACCTACTTGTTTCGTCGACGCGAGGCTGAATTGCCCGAACGTTTC
GACTATGCTGAATATTCAAAGATAATTACCGACTTCGGCACGCATTACTATTCGAGCGGA
GTTTTGGGCGGAGAGTTTGAAACCATTTATCGTTACGATAGATCGGAATTGACAGAATCA
ACCCTTACTGAAGAAGAACAGAAGCATTGTCTAGAGAATGAAATTTTTTCTATAAAATCT
GAAAAATGTTCGACAAATGCCCTGTCGCAACGCTATGACGGGAGTTTCATCGGAGCGGCA
AAAGATGTTGTAGTTACGGTGAAAGGCGGATCGTCTGACACCGCCGCATCTCTAAGTTTC
TCCCAACAAGAAACACCTTCGAAGGAAGATTTTGACGCCTGGGCGGCAACCGTCAAGGAC
AATCCTGCAGTGGTCGACTTTATGGTA
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[1-29] 2.6E-5 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[1-30] 9.338 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[6-29] 4.69447E-6 |
| ProSiteProfiles |
MACPF (IPR020864) - T[32-329] 27.13 |
| Pfam |
MACPF (IPR020864) - T[153-327] 1.1E-24 |
| SMART |
MACPF (IPR020864) - T[163-328] 4.9E-12 |
| PRINTS |
MAC_perforin (IPR001862) - T[194-216] 4.6E-7 - T[313-329] 4.6E-7 |
| ProSitePatterns |
MACPF_CS (IPR020863) - T[205-216] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CO6_HUMAN | 32.743 % | 175 | 5.12E-49 |
| CO8A_HUMAN | 25.956 % | 120 | 2.61E-30 |
| CO8B_HUMAN | 27.479 % | 137 | 4.04E-36 |