- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3286.g05593.05.t
Possible name(s)
TUBA1A; TUBA1B; TUBA3C
Gene model
Location
S3286 [1,728 / 5,220]
Amino acid sequence
Length: 416
>Phfumi.CG.MTP2014.S3286.g05593.05.p
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEGEEY
Nucleotide sequence
Length: 1,251
>Phfumi.CG.MTP2014.S3286.g05593.05.t
ATGCCGAGCGACAAGACCATTGGCGGGGGCGACGATTCCTTCAACACCTTCTTCAGCGAG
ACAGGAGCCGGAAAGCACGTGCCCCGCGCTGTGTTTGTCGACCTCGAGCCAACAGTCGTC
GACGAAGTTCGCACTGGAACCTACCGTCAGCTTTTCCACCCGGAGCAGCTGATCACCGGT
AAAGAGGATGCAGCGAACAACTACGCTCGTGGTCACTACACCATCGGCAAAGAAATTGTC
GACCTGGTCCTTGACCGCATCCGAAAGCTTGCTGACCAGTGCACTGGACTCCAGGGCTTC
CTTATCTTCCATTCCTTTGGAGGAGGGACCGGATCCGGATTCACCTCTCTTCTTATGGAG
AGACTCTCTGTCGACTATGGCAAGAAATCCAAACTAGAATTTGCCATCTACCCAGCCCCA
CAGGTTTCCACCGCCGTGGTCGAGCCATACAACTCGATCTTGACCACTCACACCACTCTT
GAACACTCGGACTGTGCCTTCATGGTCGACAACGAAGCCATCTACGACATTTGCCGACGT
AACTTGGACATCGAGCGACCAACCTACACTAACCTTAACCGGCTTGTTGGGCAGATCGTC
TCCTCCATCACTGCTTCACTGCGTTTTGATGGTGCCCTTAACGTCGATCTTACTGAATTC
CAAACTAACTTGGTGCCCTACCCACGTATTCACTTCCCATTGGCCACATACGCCCCGGTG
ATCTCAGCCGAGAAGGCTTACCACGAGCAGCTCTCGGTCGCCGAAATCACCAACGCTTGC
TTCGAGCCGGCCAACCAGATGGTGAAGTGCGATCCACGTCACGGCAAATACATGGCGTGC
TGCATGTTGTATCGTGGTGACGTTGTACCCAAAGATGTCAACGCAGCCATTGCTACTATC
AAGACAAAGCGCACCATTCAGTTCGTTGACTGGTGCCCAACCGGATTCAAAGTTGGAATC
AACTACCAGCCGCCCACCGTTGTGCCCGGTGGAGATTTGGCCAAAGTGCAACGTGCGGTT
TGCATGTTGAGCAACACCACCGCCATCGCCGAGGCGTGGGCTCGTCTGGATCACAAGTTC
GACTTGATGTACGCCAAGCGCGCATTCGTTCACTGGTATGTCGGAGAGGGAATGGAAGAA
GGCGAGTTCTCTGAGGCGAGAGAGGATCTTGCAGCTCTGGAGAAGGATTACGAAGAAGTC
GGAGTCGACTCCGTAGAGGGAGAAGGCGAGGAGGAAGGGGAAGAGTATTAA
| PANTHER |
Tubulin (IPR000217) - T[1-412] 5.0E-294 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-233] 4.8E-110 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[4-209] 1.09E-82 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[10-23] 2.7E-111 - T[53-66] 2.7E-111 - T[85-93] 2.7E-111 - T[113-125] 2.7E-111 - T[126-137] 2.7E-111 - T[179-191] 2.7E-111 - T[239-254] 2.7E-111 - T[286-307] 2.7E-111 - T[312-325] 2.7E-111 - T[325-344] 2.7E-111 - T[350-366] 2.7E-111 - T[387-403] 2.7E-111 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[12-178] 9.3E-54 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[14-211] 2.4E-83 |
| PRINTS |
Tubulin (IPR000217) - T[18-37] 5.2E-80 - T[60-71] 5.2E-80 - T[73-97] 5.2E-80 - T[99-117] 5.2E-80 - T[118-139] 5.2E-80 - T[143-156] 5.2E-80 - T[157-177] 5.2E-80 - T[345-373] 5.2E-80 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[107-113] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[211-402] 3.97E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[213-358] 1.8E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[228-357] 5.0E-52 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[234-348] 6.5E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[349-415] 1.2E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 98.317 % | 862 | 0 |
| TBA1B_HUMAN | 97.837 % | 859 | 0 |
| TBA3C_HUMAN | 98.558 % | 853 | 0 |