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TRANSCRIPT CARD

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  1. Molecular Tool 'Hr-PEM mRNA' > 
  2. Transcript 'Phfumi.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S3547.g05789.02.t

Possible name(s)

RPL6

Gene model

Phfumi.CG.MTP2014.S3547.g05789

Location

S3547 [14,383 / 15,232]

Sequences

Amino acid sequence

Length: 137

>Phfumi.CG.MTP2014.S3547.g05789.02.p
RRDNTAMAKMAKPHAPRNKPLGGGINRYSRSVMYARRYAFKKRKNITKIEKKRAERMTEK
PIGGDKNGGTRLVRVKKMPRYYPTEELPRKLRSHGKKPFSQHKRKLRSTITPGTVLILLA
GPFRGKRVVFLKQLDTG

Nucleotide sequence

Length: 411

>Phfumi.CG.MTP2014.S3547.g05789.02.t
CGCAGAGATAATACGGCCATGGCGAAGATGGCGAAACCTCACGCGCCGAGGAATAAACCC
CTCGGTGGTGGAATCAATCGTTACTCGCGGTCAGTGATGTACGCCAGGCGATATGCTTTC
AAAAAACGAAAAAACATCACCAAAATCGAGAAGAAGCGAGCAGAGAGGATGACAGAAAAA
CCGATTGGAGGAGACAAAAACGGCGGAACCCGTCTTGTTCGCGTCAAGAAGATGCCACGT
TACTATCCAACGGAGGAACTTCCCAGAAAACTGAGGTCACATGGCAAGAAACCATTTAGC
CAACACAAGCGCAAGCTGCGGTCAACAATCACACCAGGGACTGTGCTTATTCTTCTGGCT
GGTCCTTTCCGTGGAAAGCGAGTCGTTTTCTTGAAACAGTTGGACACTGGA

InterProScan

Pfam
Ribosomal_L6_N (IPR005568) - T[8-55] 2.4E-11
PANTHER
60S_ribosomal_L6E (IPR000915) - T[9-137] 2.2E-44
SUPERFAMILY
Translation_prot_SH3-like_sf (IPR008991) - T[108-137] 9.32E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL6_HUMAN 58.915 % 149 1.11E-45