Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S38.g00551.01.t

Possible name(s)

COQ6

Gene model

Phfumi.CG.MTP2014.S38.g00551

Location

S38 [72,017 / 73,255]

Sequences

Amino acid sequence

Length: 289

>Phfumi.CG.MTP2014.S38.g00551.01.p
SCSDGMITFEQNNMSDDLCYIVENDMITGSFFKLLESKFNDKIEVKYNCKVVSCKNPRNF
AIEDGRQSIPLVTLQLGNNSEVTTKLLIAADGANSFIAQSCDVKFLRRTYEQSAVVSNLK
LHERSENIVAWQRFLPTGPIALLPLDETTSSLVWSTTHQHAKDLLQMSEEEFVAEVNNAF
WQDYSQQDIVKNLESFTKTLLSLAKPDDSFVMQYPPTVTRLAGGRFKFPLSCSHANEYVK
PRVAFVGDSIHRVHPLAGQGVNLGFRDVDCLIKVLEKAVYEGKDLGKAL

Nucleotide sequence

Length: 867

>Phfumi.CG.MTP2014.S38.g00551.01.t
TCATGTTCTGATGGAATGATCACATTTGAACAAAACAACATGTCAGATGATCTTTGCTAC
ATAGTTGAGAATGACATGATAACAGGCAGTTTCTTCAAACTGCTTGAATCTAAATTCAAT
GACAAAATAGAAGTCAAGTACAACTGCAAAGTAGTTTCTTGTAAAAATCCACGAAATTTT
GCTATTGAGGATGGAAGACAATCTATTCCTTTAGTAACGCTACAGCTTGGCAATAATTCC
GAAGTTACAACTAAACTCTTGATTGCTGCTGATGGAGCTAATTCTTTCATAGCACAGTCA
TGTGATGTAAAATTCCTGAGAAGAACGTATGAACAATCAGCAGTTGTTAGCAATTTAAAA
TTGCATGAACGCAGTGAAAACATAGTCGCTTGGCAAAGATTTCTGCCCACAGGCCCGATT
GCCTTGCTTCCACTGGATGAAACTACAAGTTCTTTAGTTTGGAGTACAACACATCAACAT
GCCAAAGACCTACTTCAAATGTCTGAGGAAGAATTTGTAGCTGAAGTTAACAATGCTTTT
TGGCAAGATTATTCACAACAAGATATTGTCAAAAACCTTGAAAGCTTCACAAAAACATTG
TTAAGTCTTGCAAAACCAGATGATAGTTTTGTGATGCAATATCCACCCACTGTTACCAGA
CTAGCTGGAGGTCGATTCAAGTTTCCCCTTAGTTGTAGTCATGCCAATGAATATGTCAAA
CCAAGAGTTGCATTTGTCGGAGATTCAATACATAGGGTACATCCACTTGCGGGACAAGGA
GTTAATTTGGGATTTAGAGATGTTGACTGCCTAATCAAAGTTTTGGAAAAAGCTGTGTAT
GAAGGAAAAGATTTGGGTAAAGCACTT

InterProScan

TIGRFAM	UbiH/COQ6 (IPR010971) - T[2-287] 5.0E-75
SUPERFAMILY	FAD/NAD-bd_sf (IPR036188) - T[20-282] 3.14E-21
Gene3D	FAD/NAD-bd_sf (IPR036188) - T[217-289] 2.3E-17
Pfam	FAD-bd (IPR002938) - T[232-277] 8.6E-7
ProSitePatterns	Ubi_Hdrlase_CS (IPR018168) - T[254-267] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
COQ6_HUMAN	48.78 %	277	6.31E-91