- Clone 'AHC0AAA114YH08' >
- Clone 'cima8107678' >
- Clone 'cien133699' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3.g00078.01.t
Possible name(s)
MLH1; PMS1; PMS2
Gene model
Location
S3 [284,986 / 292,063]
Amino acid sequence
Length: 612
>Phfumi.CG.MTP2014.S3.g00078.01.p
MSDGRNVVIKRLDETVVNRIAAGEVSIKSGGLKMIQISDNGHGIRKQDMEIVCERFTTSK
LKEFNDLRSITTFGFRGEALASISHVAHLSISSKTKESQCGYKASYIDGKMKDQPRPTAS
NDGTQITVEDLFYNVLTRRKAFRSASEEHQRIADVITRYAIHNSGKSFTLRKSDNDTASG
VTVRTQPGASTLDNIRTLFGSNVANEVIPVEHENEKLHLKSYLPKGGHPFVYLSLEMAPT
NLDVNVHPTKHEKLLPTASNISKEVSDKEAAKQQSDRVYDHNLVRTDSKLQKLDAFLVKT
PKEKEKPSGKTSLTKNISVDSRASTSSSGNLTAADLPRKRKIQLTSVLQLQEETRKRASQ
DLTDILREHTFVGCVDPELALIQHKTKLYLANTTKLTREMFYQIVLEDFGNFGMLRLSEP
APIHELAMLGLEMKESGWTPEDGSKEDLADYIVKFLSEKAEMLKDYFRLEIKDGDVTAIP
MLLQNYIPPLEGLPMLVLRIATEVSWDDEKDCFETFAREIARFYAVRKGYTDLGDIIKQR
DAQVAMELGDAVAPNNEAPESQSAPSPWKRTVEHVIYRAMRSHAKPDERMAKDGTFLQLA
NLPDLYKVFERC
Nucleotide sequence
Length: 1,839
>Phfumi.CG.MTP2014.S3.g00078.01.t
ATGTCCGACGGCAGGAATGTGGTGATCAAGCGTTTGGACGAAACTGTGGTAAACAGAATA
GCAGCTGGCGAAGTTTCCATTAAATCAGGAGGGTTAAAGATGATTCAAATTTCTGATAAT
GGTCATGGGATTAGGAAACAAGACATGGAAATTGTTTGTGAAAGATTTACGACCAGCAAA
CTCAAAGAGTTCAATGACCTGCGATCTATAACAACTTTTGGATTCCGGGGGGAAGCATTG
GCTAGTATAAGTCATGTTGCACATCTGTCCATATCCAGCAAAACCAAAGAGAGCCAGTGT
GGATACAAAGCAAGTTACATTGATGGCAAAATGAAAGACCAACCTAGACCAACAGCCAGC
AACGATGGAACTCAAATTACAGTAGAAGATCTGTTTTACAATGTGTTGACAAGGAGGAAA
GCCTTTCGCAGTGCTTCTGAAGAACACCAAAGAATTGCTGATGTCATCACAAGATATGCT
ATCCACAACTCTGGAAAATCATTTACACTTCGCAAATCAGACAATGACACTGCAAGTGGT
GTGACAGTTCGAACTCAGCCCGGTGCTTCCACGCTTGACAATATCAGAACCTTGTTCGGT
TCCAATGTTGCAAATGAGGTTATTCCAGTTGAACATGAAAATGAAAAACTGCATTTAAAG
TCATATCTTCCGAAAGGTGGTCATCCATTTGTTTATCTTAGCCTGGAAATGGCCCCAACC
AACCTCGATGTTAACGTTCATCCCACCAAACATGAGAAATTGCTGCCCACCGCTAGCAAC
ATATCTAAAGAAGTTTCCGATAAGGAAGCTGCAAAACAACAGAGTGACAGAGTTTATGAC
CATAACTTGGTAAGGACTGACAGCAAATTGCAAAAACTGGATGCTTTTTTAGTTAAAACT
CCAAAGGAAAAAGAAAAACCCAGTGGAAAAACAAGTTTGACGAAAAACATCTCAGTTGAT
TCCCGTGCTTCCACATCATCCAGTGGCAATCTAACTGCAGCAGATTTGCCTCGGAAGCGC
AAAATCCAACTGACCAGTGTTCTGCAACTACAAGAAGAAACCAGGAAAAGAGCAAGTCAA
GATTTGACGGATATATTACGCGAACATACGTTCGTCGGGTGTGTGGACCCGGAATTGGCA
CTGATCCAACACAAGACTAAACTCTACCTTGCCAACACGACCAAGTTGACACGAGAAATG
TTTTACCAAATTGTCCTAGAAGATTTCGGAAACTTCGGAATGCTTCGTCTTTCAGAACCG
GCACCCATTCACGAATTAGCAATGCTTGGACTTGAGATGAAAGAATCAGGTTGGACGCCG
GAAGATGGCAGCAAAGAGGACCTTGCCGATTACATCGTAAAGTTTTTGTCGGAAAAGGCC
GAAATGTTGAAGGACTATTTTCGCCTCGAAATCAAGGACGGTGACGTCACTGCAATCCCG
ATGCTGCTTCAAAACTACATCCCACCACTAGAGGGCCTCCCTATGCTCGTGTTACGTATT
GCCACTGAGGTTAGCTGGGATGACGAAAAGGACTGCTTCGAGACATTTGCGCGCGAAATT
GCCAGATTTTACGCCGTGCGCAAAGGCTACACCGACCTGGGAGACATCATCAAACAAAGA
GACGCACAAGTTGCTATGGAGCTCGGTGACGCCGTTGCCCCTAACAACGAGGCACCCGAA
AGCCAGAGCGCCCCGTCGCCATGGAAACGGACGGTTGAACACGTGATCTACCGAGCTATG
CGCAGCCATGCGAAACCGGATGAGCGCATGGCAAAAGACGGGACTTTTCTTCAGCTAGCA
AACTTGCCTGATTTGTACAAAGTTTTCGAGCGCTGTTGA
| PANTHER |
DNA_mismatch_repair_MLH1 (IPR011186) - T[8-219] 4.3E-186 - T[220-328] 4.3E-186 - T[325-612] 4.3E-186 |
| CDD |
HATPase_C (IPR003594) - T[22-97] 2.15415E-4 |
| Gene3D |
HATPase_C_sf (IPR036890) - T[24-199] 5.3E-54 |
| SUPERFAMILY |
HATPase_C_sf (IPR036890) - T[24-179] 8.08E-36 |
| ProSitePatterns |
DNA_mismatch_repair_CS (IPR014762) - T[74-80] . |
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[182-255] 3.03E-9 |
| SMART |
DNA_mismatch_repair_C (IPR013507) - T[195-270] 3.7E-4 |
| Gene3D |
Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[200-282] 3.0E-12 |
| Pfam |
DNA_mismatch_repair_C (IPR013507) - T[221-266] 2.6E-9 |
| Pfam |
Mlh1_C (IPR032189) - T[343-612] 8.0E-92 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PMS2_HUMAN | 29.557 % | 94 | 5.85E-20 |
| PMS1_HUMAN | 26.587 % | 85.9 | 2.68E-17 |
| MLH1_HUMAN | 44.603 % | 627 | 0 |