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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C4.9.v2.A....' > 
  2. Clone 'cien123187' > 
  3. Transcript 'KH2012:KH.S423.8.v1....' > 
  4. Transcript 'Haaura.CG.MTP2014.S2...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4003.g06097.01.t

Possible name(s)

RAB11A; RAB11B; RAB25

Gene model

Phfumi.CG.MTP2014.S4003.g06097

Location

S4003 [6,019 / 9,252]

Sequences

Amino acid sequence

Length: 171

>Phfumi.CG.MTP2014.S4003.g06097.01.p
MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDAKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTG

Nucleotide sequence

Length: 513

>Phfumi.CG.MTP2014.S4003.g06097.01.t
ATGGGAAACAGGGATGATGAATATGACTATCTTTTTAAAGTTGTCTTAATCGGTGATTCT
GGGGTGGGGAAAAGTAATTTGTTGTCACGGTTTACAAGAAATGAGTTCAATTTGGAAAGT
AAAAGCACCATTGGGGTTGAGTTTGCCACTAGAAGTATCCAAGTTGATGCCAAAACCATA
AAAGCACAGATTTGGGACACTGCTGGGCAAGAACGATACAGAGCAATTACTTCTGCGTAC
TACCGTGGTGCAGTGGGAGCATTGTTGGTGTATGACATTGCCAAACATTTAACCTATGAA
AATGTGGAGCGTTGGTTAAAGGAATTGAGAGATCATGCTGACAACAATATTGTTATTATG
TTAGTGGGAAACAAAAGCGATTTACGACATCTTAGAGCTGTACCTACTGATGAAGCAAAA
GCATTTTCAGAAAAGAATGGACTTTCATTCATTGAAACATCTGCCCTGGATTCTACAAAT
GTTGAAGTAGCTTTTCAAAACATTCTCACAGGT

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[7-169] 1.12E-57
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[10-168] 2.7E-45
Pfam
Small_GTPase (IPR001806) - T[13-169] 1.3E-61

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 95.882 % 337 3.24E-120
RB11B_HUMAN 95.294 % 333 1.1E-118
RAB25_HUMAN 70 % 252 1.65E-86