- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4039.g06129.02.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S4039 [0 / 7,330]
Amino acid sequence
Length: 535
>Phfumi.CG.MTP2014.S4039.g06129.02.p
MPENQKNLIAIAILGTVALGLHYINQRNARYTQITWKDFVTKYLSKNMVEKLVVKNKTTA
EASASGLSDHILTFNVGSVDSLERNLEHIQEELGIAANERIYIQYEDSFQWSQILSWSIG
PLLIIGYFLVASRMMKPKSGGGNPMSGSSISGLNPFRAGESTAKVLNKQDINVSFKDVAG
CEEAKIEILEFVNFLKHPQRYEELGAKIPKGAILSGPPGTGKTLLAKATAGEASVPFISV
SGSEFLEMFVGVGASRVRDMFSLARKNAPCILFIDEVDAIGRKRTGSGIGGHSEADQTLN
QLLVEMDGFNTIGTNVVVLAGTNRSDVLDAALLRPGRFDRQIYVGLPDIKGRSSIFKIHL
KPLKTNLDKDALSRKMAVRTPGFSGADIANVCNEAALIAARDAATAIEDKHFASAIERVV
AGLEKKTQVLQPNEKTTVAYHEAGHAIVSWFLEHGDPLLKVSIVPRGKGLGYALYQPKEL
YLYTSEQMAHRMCTLLGGRCAEKIFFDKITTGAQDDLQKVTQLAYAQVTQYGMSE
Nucleotide sequence
Length: 1,605
>Phfumi.CG.MTP2014.S4039.g06129.02.t
ATGCCTGAAAATCAAAAAAATTTAATTGCCATTGCCATTCTGGGCACTGTAGCTCTGGGA
TTACATTACATCAACCAGAGGAATGCACGCTATACTCAAATAACATGGAAAGATTTTGTT
ACCAAGTATCTTTCCAAAAACATGGTTGAAAAACTTGTTGTAAAGAATAAGACAACTGCA
GAAGCAAGTGCATCCGGCCTATCCGACCACATTCTGACGTTCAATGTAGGCAGTGTTGAT
TCCCTTGAGCGAAACCTGGAACATATACAAGAGGAGCTTGGTATTGCTGCTAATGAGCGC
ATTTACATTCAATATGAAGACAGTTTTCAATGGTCCCAAATACTCTCATGGTCAATAGGC
CCACTGTTAATCATCGGATACTTCTTGGTAGCATCACGAATGATGAAACCAAAATCTGGA
GGTGGCAACCCTATGTCTGGTAGTTCAATTTCAGGTTTGAATCCTTTCCGTGCTGGCGAA
TCAACTGCGAAGGTGTTGAATAAACAGGACATCAATGTGAGCTTTAAAGACGTTGCTGGC
TGCGAAGAAGCGAAGATTGAAATATTGGAGTTCGTCAACTTCTTGAAACACCCACAGCGC
TATGAGGAGCTGGGAGCGAAAATTCCCAAAGGAGCTATTTTGTCCGGGCCACCCGGAACA
GGAAAGACGTTGTTGGCTAAGGCCACAGCAGGCGAAGCGAGTGTTCCGTTCATTTCCGTC
AGCGGTTCCGAGTTCCTCGAAATGTTTGTCGGCGTCGGAGCGTCAAGGGTGCGCGACATG
TTTTCCCTTGCGAGGAAAAATGCTCCTTGCATCCTCTTCATTGACGAGGTCGACGCCATT
GGCCGAAAACGAACCGGATCCGGAATCGGAGGACATTCCGAAGCCGACCAAACGCTTAAC
CAGCTGCTGGTCGAAATGGATGGTTTTAATACGATCGGCACAAATGTGGTGGTTTTGGCC
GGAACCAACCGAAGCGATGTGCTCGATGCTGCCCTCTTGCGGCCGGGACGTTTCGATCGT
CAGATTTACGTTGGCCTTCCCGACATTAAGGGAAGATCGTCGATATTCAAGATTCATTTG
AAGCCGCTCAAAACCAACTTGGACAAGGACGCACTGTCGAGAAAAATGGCTGTGAGGACC
CCAGGATTTTCAGGTGCTGACATTGCGAATGTTTGCAACGAAGCTGCGTTAATCGCTGCC
AGGGATGCGGCAACGGCGATCGAAGACAAGCACTTTGCTTCCGCTATAGAGAGGGTTGTG
GCAGGGCTTGAAAAAAAGACCCAAGTCCTTCAACCAAACGAAAAAACAACAGTCGCTTAT
CATGAAGCGGGACATGCCATCGTCAGTTGGTTTCTGGAACATGGCGACCCACTCCTGAAA
GTGTCGATTGTTCCTAGAGGCAAAGGGCTCGGCTACGCTTTGTACCAACCTAAGGAGTTG
TATCTCTACACTTCAGAACAGATGGCGCACCGCATGTGCACGCTGCTTGGTGGCAGATGC
GCCGAGAAGATCTTCTTCGACAAGATAACCACCGGGGCTCAAGACGATCTGCAAAAAGTG
ACGCAGCTAGCCTATGCCCAGGTGACGCAGTACGGAATGAGCGAG
| Pfam |
Pept_M41_FtsH_extracell (IPR011546) - T[9-99] 6.6E-7 |
| TIGRFAM |
FtsH (IPR005936) - T[115-535] 1.5E-179 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[169-419] 2.57E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[208-348] 3.1E-21 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[213-345] 2.2E-41 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[316-334] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[429-535] 2.2E-43 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[429-535] 2.75E-42 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 44.322 % | 446 | 5.19E-149 |
| AFG32_HUMAN | 64.491 % | 667 | 0 |
| YMEL1_HUMAN | 46.866 % | 330 | 2.76E-104 |