- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R172...' >
- Transcript 'KH2012:KH.L112.13.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4164.g06198.01.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S4164 [339 / 7,361]
Amino acid sequence
Length: 500
>Phfumi.CG.MTP2014.S4164.g06198.01.p
LQARIAFLQGERKGQENLKRDLIRRIKMLEFALKQERAKVHKLRFGNEMSMDQIINDAND
DSKTTEIPTANANMSWRHGRQLLRQYLQEVGYSDTILDVRSQRVKALLGNNYDMNKSVEN
DNKMVNGDMSDEEKAKNKSGSFNLPVVNDQTESVLHDFDFLNSADNEDEDVPMQDEDVIT
SGDHQRKARANKDEVDGMSVDTATAIAEFDFLNPDAEEPDDAKATDWTIDQNKLNAMKQQ
FRLEKKQQKKKGMKRPAKKHLQDMLQTFQGAEMQKANDDIDIHIPEEENLPFTVGGGQTG
DESIETALGLGALAGLTVANEADPLAYDMSATKETFRKTWNPKFTLRSHFDGIRAVRFLP
TESAVLTASEDNTMKLWNLNKPLPNKKSQALDVEPIYSFRGHVGAVLCLDVSADGVFCFS
GGIDSSVRCWALPNINIDAYDTYDSSLAGEILVGHTDAVWSLSYSNTRQQLLSASADNSI
KLWRPTSNDPLVQTYAVDGK
Nucleotide sequence
Length: 1,500
>Phfumi.CG.MTP2014.S4164.g06198.01.t
TTACAGGCAAGAATCGCTTTCCTGCAGGGAGAGAGAAAGGGACAAGAGAACTTAAAACGA
GATCTTATCAGAAGAATAAAGATGTTGGAATTTGCTTTGAAGCAAGAAAGAGCCAAAGTG
CACAAGTTGAGATTCGGAAATGAAATGAGCATGGACCAAATTATTAATGATGCTAATGAT
GACTCCAAGACCACAGAAATTCCGACTGCGAATGCCAACATGTCTTGGAGACACGGAAGA
CAATTGCTCCGACAATACTTGCAGGAGGTTGGATACAGCGACACAATCCTTGATGTGCGA
TCACAAAGAGTAAAAGCTCTCCTTGGAAACAACTATGACATGAACAAATCTGTGGAAAAT
GATAATAAAATGGTGAATGGTGATATGTCCGATGAAGAAAAAGCGAAAAATAAATCTGGA
AGTTTCAATCTTCCCGTTGTCAACGACCAAACTGAAAGTGTTTTGCATGATTTTGATTTC
CTAAACTCAGCTGATAACGAGGATGAAGACGTTCCCATGCAAGATGAAGATGTTATCACT
TCTGGGGACCATCAGAGGAAAGCAAGAGCCAACAAAGATGAGGTTGACGGAATGAGTGTT
GATACCGCAACAGCAATTGCCGAGTTTGACTTCTTGAATCCAGACGCTGAAGAACCGGAT
GATGCAAAAGCCACTGATTGGACGATTGATCAGAATAAATTGAATGCAATGAAACAACAG
TTTCGGTTGGAGAAAAAACAGCAGAAAAAGAAGGGAATGAAAAGACCAGCAAAGAAACAC
TTGCAAGATATGTTACAGACTTTCCAGGGTGCTGAGATGCAGAAAGCTAATGATGACATT
GATATTCACATACCTGAAGAAGAGAACCTTCCATTCACTGTGGGAGGGGGACAGACTGGA
GATGAATCAATTGAAACTGCTCTTGGGCTTGGAGCTCTAGCTGGACTCACTGTAGCTAAT
GAAGCTGACCCTCTTGCATACGATATGTCAGCGACCAAGGAGACCTTTAGAAAAACCTGG
AATCCGAAATTCACACTCCGGAGCCACTTTGATGGGATCCGGGCAGTCCGGTTCCTCCCC
ACTGAGTCGGCAGTTCTCACCGCGTCCGAAGACAACACAATGAAGTTGTGGAATTTAAAC
AAACCTCTTCCCAACAAGAAGAGCCAGGCTTTAGATGTTGAGCCGATATACAGCTTTCGA
GGACATGTAGGAGCAGTTCTGTGTCTTGATGTGAGCGCGGATGGAGTTTTCTGCTTCAGT
GGAGGAATTGATTCGTCAGTAAGATGTTGGGCGCTCCCTAATATCAACATTGATGCCTAC
GACACATATGATTCTTCATTGGCTGGCGAGATTTTGGTCGGACACACTGACGCGGTTTGG
TCGCTTTCTTATTCCAACACTCGCCAACAACTTCTCTCCGCATCGGCTGATAACTCAATC
AAACTGTGGAGGCCAACTTCTAATGATCCACTTGTGCAGACTTATGCCGTGGACGGTAAG
| Pfam |
Striatin_N (IPR013258) - T[1-98] 5.4E-23 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[338-492] 2.22E-29 |
| SMART |
WD40_repeat (IPR001680) - T[339-378] 1.9E-6 - T[392-431] 1.1E-6 - T[445-484] 4.5E-6 |
| Pfam |
WD40_repeat (IPR001680) - T[340-378] 0.0015 - T[394-430] 3.6E-5 - T[451-483] 5.2E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[346-380] 13.416 - T[399-430] 10.208 - T[452-493] 14.017 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[346-493] 23.493 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[365-379] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 44.727 % | 433 | 2.02E-144 |
| STRN_HUMAN | 44.872 % | 419 | 2.71E-139 |
| STRN4_HUMAN | 39.544 % | 328 | 1.49E-104 |