- Transcript 'Cisavi.CG.ENS81.R172...' >
- Transcript 'Cisavi.CG.ENS81.R172...' >
- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R172...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4164.g06198.02.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S4164 [339 / 9,153]
Amino acid sequence
Length: 660
>Phfumi.CG.MTP2014.S4164.g06198.02.p
LQARIAFLQGERKGQENLKRDLIRRIKMLEFALKQERAKVHKLRFGNEMSMDQIINDAND
DSKTTEIPTANANMSWRHGRQLLRQYLQEVGYSDTILDVRSQRVKALLGNNYDMNKSVEN
DNKMVNGDMSDEEKAKNKSGSFNLPVVNDQTESVLHDFDFLNSADNEDEDVPMQDEDVIT
SGDHQRKARANKDEVDGMSVDTATAIAEFDFLNPDAEEPDDAKATDWTIDQNKLNAMKQQ
FRLEKKQQKKKGMKRPAKKHLQDMLQTFQGAEMQKANDDIDIHIPEEENLPFTVGGGQTG
DESIETALGLGALAGLTVANEADPLAYDMSATKETFRKTWNPKFTLRSHFDGIRAVRFLP
TESAVLTASEDNTMKLWNLNKPLPNKKSQALDVEPIYSFRGHVGAVLCLDVSADGVFCFS
GGIDSSVRCWALPNINIDAYDTYDSSLAGEILVGHTDAVWSLSYSNTRQQLLSASADNSI
KLWRPTSNDPLVQTYAVDGLSTPTCVEFVQCDSNHAVVSHTDGKVVVYDLETGKVPVILS
ESDTGRVNAVATHPTMPITMTAHDDRHIKFFDNSSGKLIHSMVAHLDSVTSLSVDPNGLY
LLSGSHDSSIRLWNLDSKTCIQELTSHRKKFDESIYSVAFHPSATYIASAGADALAKVFV
Nucleotide sequence
Length: 1,983
>Phfumi.CG.MTP2014.S4164.g06198.02.t
TTACAGGCAAGAATCGCTTTCCTGCAGGGAGAGAGAAAGGGACAAGAGAACTTAAAACGA
GATCTTATCAGAAGAATAAAGATGTTGGAATTTGCTTTGAAGCAAGAAAGAGCCAAAGTG
CACAAGTTGAGATTCGGAAATGAAATGAGCATGGACCAAATTATTAATGATGCTAATGAT
GACTCCAAGACCACAGAAATTCCGACTGCGAATGCCAACATGTCTTGGAGACACGGAAGA
CAATTGCTCCGACAATACTTGCAGGAGGTTGGATACAGCGACACAATCCTTGATGTGCGA
TCACAAAGAGTAAAAGCTCTCCTTGGAAACAACTATGACATGAACAAATCTGTGGAAAAT
GATAATAAAATGGTGAATGGTGATATGTCCGATGAAGAAAAAGCGAAAAATAAATCTGGA
AGTTTCAATCTTCCCGTTGTCAACGACCAAACTGAAAGTGTTTTGCATGATTTTGATTTC
CTAAACTCAGCTGATAACGAGGATGAAGACGTTCCCATGCAAGATGAAGATGTTATCACT
TCTGGGGACCATCAGAGGAAAGCAAGAGCCAACAAAGATGAGGTTGACGGAATGAGTGTT
GATACCGCAACAGCAATTGCCGAGTTTGACTTCTTGAATCCAGACGCTGAAGAACCGGAT
GATGCAAAAGCCACTGATTGGACGATTGATCAGAATAAATTGAATGCAATGAAACAACAG
TTTCGGTTGGAGAAAAAACAGCAGAAAAAGAAGGGAATGAAAAGACCAGCAAAGAAACAC
TTGCAAGATATGTTACAGACTTTCCAGGGTGCTGAGATGCAGAAAGCTAATGATGACATT
GATATTCACATACCTGAAGAAGAGAACCTTCCATTCACTGTGGGAGGGGGACAGACTGGA
GATGAATCAATTGAAACTGCTCTTGGGCTTGGAGCTCTAGCTGGACTCACTGTAGCTAAT
GAAGCTGACCCTCTTGCATACGATATGTCAGCGACCAAGGAGACCTTTAGAAAAACCTGG
AATCCGAAATTCACACTCCGGAGCCACTTTGATGGGATCCGGGCAGTCCGGTTCCTCCCC
ACTGAGTCGGCAGTTCTCACCGCGTCCGAAGACAACACAATGAAGTTGTGGAATTTAAAC
AAACCTCTTCCCAACAAGAAGAGCCAGGCTTTAGATGTTGAGCCGATATACAGCTTTCGA
GGACATGTAGGAGCAGTTCTGTGTCTTGATGTGAGCGCGGATGGAGTTTTCTGCTTCAGT
GGAGGAATTGATTCGTCAGTAAGATGTTGGGCGCTCCCTAATATCAACATTGATGCCTAC
GACACATATGATTCTTCATTGGCTGGCGAGATTTTGGTCGGACACACTGACGCGGTTTGG
TCGCTTTCTTATTCCAACACTCGCCAACAACTTCTCTCCGCATCGGCTGATAACTCAATC
AAACTGTGGAGGCCAACTTCTAATGATCCACTTGTGCAGACTTATGCCGTGGACGGTTTA
TCGACGCCCACTTGTGTTGAGTTTGTGCAATGCGACTCTAACCACGCGGTGGTGTCCCAC
ACCGACGGGAAAGTTGTTGTATATGATCTTGAAACTGGAAAAGTACCTGTCATTCTGTCT
GAGAGCGACACAGGTCGAGTGAACGCAGTCGCAACCCACCCAACCATGCCTATCACCATG
ACAGCACACGATGATCGCCACATCAAGTTTTTTGATAATTCTTCAGGCAAGTTGATCCAC
TCGATGGTCGCCCATCTTGATTCGGTGACGAGTCTCTCTGTCGACCCTAACGGCCTCTAC
CTTCTCTCGGGAAGTCACGATTCCTCCATTCGACTCTGGAACCTCGACAGCAAGACATGC
ATACAAGAGCTGACGTCACACCGCAAGAAGTTCGACGAGTCCATCTACTCTGTGGCTTTC
CATCCTAGCGCAACTTACATTGCCAGTGCCGGCGCCGACGCCCTCGCAAAAGTCTTCGTA
TGA
| Pfam |
Striatin_N (IPR013258) - T[1-98] 8.3E-23 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[338-659] 4.21E-65 |
| SMART |
WD40_repeat (IPR001680) - T[339-378] 1.9E-6 - T[392-431] 1.1E-6 - T[445-484] 4.5E-6 - T[488-529] 9.5 - T[532-572] 1.1 - T[575-614] 5.8E-10 - T[617-660] 1.6E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[340-378] 0.0021 - T[394-430] 5.2E-5 - T[451-483] 7.4E-4 - T[576-614] 3.5E-8 - T[619-654] 0.0082 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[346-380] 13.416 - T[399-430] 10.208 - T[452-493] 14.017 - T[582-623] 16.423 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[346-660] 43.265 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[365-379] 1.5E-6 - T[471-485] 1.5E-6 - T[601-615] 1.5E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[365-379] . - T[601-615] . |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[542-659] 1.2E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 49.791 % | 662 | 0 |
| STRN_HUMAN | 48.607 % | 630 | 0 |
| STRN4_HUMAN | 43.472 % | 521 | 5.61E-177 |