- Transcript 'Boleac.CG.SB_v3.S682...' >
- Transcript 'KH2012:KH.C9.26.v1.A...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4289.g06265.01.t
Possible name(s)
RBM23; RBM41; RNPC3
Gene model
Location
S4289 [3 / 1,717]
Amino acid sequence
Length: 490
>Phfumi.CG.MTP2014.S4289.g06265.01.p
MSNYKNTLYVKHLPPNLNQNEKKQLFELFGPKDIRIMPDHGRFRNTAFVTFENEIHAKEA
LNRLHQLEILDFTLSVEYARKCHDDLLKINTDDKQKDSFETEVKEKPMEATKKVQNNSKS
CKFCRRLPPIAPGFGLEYPANPGLKYKYPEPNSNILLNICAALVTVPKFYTQVLHLMNKM
NMYCPFSPATHIPPMLVEHVKQTLNMDPLQPYCYKEEPNVMEESDVEMGSNSESEYESSN
EDTSKKSNLNLLPPEKVLKSLKRKRKTISSSPKRKLARMKDTDALKPKQTHQIAAIDDTL
FDKSEVSAATKRIKLNLPSTIEVSEDPPKYEMPAEDTRAGFGRIMPKQNTKNLKSNEDNG
NYNISFDFISRKQLDSGRLSSKEMSSHSLFKNYRPGEPSCRLYVKNLSKKVTDKDMQHIF
GAFVNFDNEEEAKMFDVRVMTQGRMKGQAFIGMPSIKTAKEALQCVNGYQLIGKPMVVLY
ARSAKPKSES
Nucleotide sequence
Length: 1,470
>Phfumi.CG.MTP2014.S4289.g06265.01.t
ATGTCTAATTACAAAAATACCCTATATGTGAAGCACCTCCCGCCAAATCTCAATCAAAAT
GAAAAGAAACAATTGTTTGAGTTGTTTGGTCCAAAAGACATCAGAATAATGCCAGACCAC
GGACGTTTTAGAAACACTGCCTTCGTAACATTTGAAAACGAAATTCACGCAAAAGAGGCT
TTGAATCGGCTACACCAGTTGGAAATTCTAGATTTCACACTGTCAGTTGAGTATGCCAGA
AAATGCCACGATGATTTACTGAAAATTAACACTGACGACAAACAAAAAGACAGTTTTGAG
ACAGAGGTCAAGGAAAAACCTATGGAAGCAACTAAAAAAGTCCAGAACAACAGTAAAAGT
TGTAAATTTTGTCGCAGACTGCCTCCGATTGCTCCTGGTTTTGGATTGGAATATCCTGCC
AATCCAGGTCTGAAATACAAGTATCCTGAACCAAACTCCAACATTCTGTTAAATATTTGT
GCTGCTCTAGTCACTGTTCCCAAGTTTTACACACAAGTTTTGCATCTGATGAACAAAATG
AACATGTATTGTCCATTTTCGCCGGCAACTCATATTCCTCCAATGCTGGTGGAACATGTA
AAACAGACATTAAACATGGATCCATTACAGCCGTATTGTTACAAAGAAGAACCTAATGTA
ATGGAAGAGAGTGATGTTGAAATGGGCAGTAACTCAGAGTCGGAATATGAAAGCAGTAAC
GAGGACACATCGAAGAAGTCCAACCTCAATCTACTGCCACCAGAGAAAGTATTAAAGTCC
TTAAAAAGGAAGCGGAAAACTATTTCGAGTTCGCCAAAACGAAAACTTGCCAGAATGAAA
GACACAGATGCATTGAAACCTAAACAAACTCATCAAATTGCTGCTATTGATGACACACTG
TTTGACAAATCTGAAGTTAGCGCAGCCACAAAGCGGATTAAACTAAATTTGCCTTCAACC
ATAGAAGTGTCTGAAGATCCTCCTAAATATGAAATGCCTGCAGAAGACACTAGGGCTGGC
TTTGGAAGAATTATGCCAAAGCAAAACACAAAAAACCTAAAGTCAAACGAAGACAATGGT
AATTACAATATATCTTTTGATTTCATCTCAAGAAAGCAACTTGATTCTGGCAGATTAAGC
TCTAAAGAGATGTCTTCCCATTCCTTGTTTAAGAACTATCGACCAGGGGAACCATCTTGT
CGGCTCTATGTAAAAAATCTCTCCAAGAAGGTCACAGACAAGGACATGCAGCATATATTT
GGTGCCTTTGTTAACTTTGATAATGAGGAAGAAGCCAAAATGTTTGATGTAAGAGTCATG
ACACAAGGACGCATGAAGGGACAGGCTTTTATAGGAATGCCGAGCATTAAAACAGCTAAA
GAAGCGCTACAGTGTGTCAATGGATACCAATTGATTGGAAAACCAATGGTAGTTCTCTAT
GCAAGATCAGCCAAACCAAAATCTGAAAGT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-120] 2.1E-16 - T[396-490] 2.3E-21 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[5-80] 4.43E-17 - T[380-487] 8.06E-17 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[6-81] 13.123 - T[400-483] 14.01 |
| SMART |
RRM_dom (IPR000504) - T[7-77] 2.3E-14 - T[401-479] 2.5E-8 |
| CDD |
RBM40_RRM1 (IPR034147) - T[7-79] 1.9532E-28 |
| Pfam |
RRM_dom (IPR000504) - T[8-74] 2.4E-13 - T[402-475] 4.4E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBM40_HUMAN | 39.096 % | 292 | 2.82E-93 |
| RBM41_HUMAN | 39.024 % | 92.8 | 2.32E-20 |