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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R107...' > 
  2. Clone 'cien28984' > 
  3. Clone 'cima820644' > 
  4. Transcript 'Cisavi.CG.ENS81.R54....' > 
  5. Transcript 'Phfumi.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4387.g06328.01.t

Possible name(s)

AP002373.1; RBM11; RBM7

Gene model

Phfumi.CG.MTP2014.S4387.g06328

Location

S4387 [11,088 / 11,748]

Sequences

Amino acid sequence

Length: 219

>Phfumi.CG.MTP2014.S4387.g06328.01.p
MSDTNCTLFVGNLSDKVTEEILFELFLQAGPVKTVCIPKDNKTGRLRNFAFVTFKHEVSV
KYSIDLLNGIKLFNLPLTVNVRRNRNGAESPQPSNDERMQQASRDLRTQVMNGQMFHAQM
MHPEMPPGSAAYYQQPIAMNSPWTAHRYVADEEYRGRHNHTPRQNSYHDRRYGREVDEDD
RYGNSGHERRKKSRHSMGRSQSGPSNYDRDYRKQSYRRR

Nucleotide sequence

Length: 660

>Phfumi.CG.MTP2014.S4387.g06328.01.t
ATGTCAGATACAAACTGCACACTTTTTGTTGGTAATCTGAGTGACAAAGTCACAGAAGAA
ATTCTGTTTGAACTATTTCTTCAAGCTGGTCCAGTGAAAACTGTATGCATACCGAAAGAC
AACAAAACCGGCCGATTGCGCAACTTTGCATTTGTCACATTCAAACATGAAGTGTCCGTT
AAGTACTCCATTGATCTGTTAAACGGAATCAAACTTTTTAATTTGCCACTTACTGTCAAT
GTTAGGCGAAATCGCAATGGGGCCGAGAGTCCGCAACCATCAAATGATGAAAGAATGCAG
CAAGCATCAAGAGATTTGCGAACGCAAGTAATGAATGGCCAAATGTTTCATGCGCAAATG
ATGCACCCAGAGATGCCACCTGGTTCTGCTGCTTACTACCAGCAACCAATTGCTATGAAT
TCTCCATGGACTGCTCATCGGTATGTTGCTGATGAAGAATACAGAGGTCGACACAACCAC
ACTCCCCGTCAAAATTCATACCATGACAGACGCTATGGTCGTGAAGTCGATGAGGACGAT
CGCTATGGTAACAGTGGTCATGAAAGACGGAAAAAGAGCAGACATAGCATGGGTCGGAGC
CAATCAGGACCATCAAATTATGACAGAGACTATAGAAAACAGTCATACAGAAGAAGATAA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-113] 3.7E-23
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[3-94] 2.55E-25
ProSiteProfiles
RRM_dom (IPR000504) - T[6-84] 15.937
SMART
RRM_dom (IPR000504) - T[7-80] 2.2E-22
Pfam
RRM_dom (IPR000504) - T[8-76] 2.4E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3B4_HUMAN 43.902 % 77.4 1.23E-16
RBM7_HUMAN 61.728 % 106 6.53E-28
RBM11_HUMAN 51.685 % 90.5 7.35E-22