- Transcript 'Cisavi.CG.ENS81.R76....' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S444.g02070.02.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S444 [961 / 7,539]
Amino acid sequence
Length: 483
>Phfumi.CG.MTP2014.S444.g02070.02.p
LVIFIAANEIFANEEFVMRELQVDLEKSGNEIVTGEKVIVEEVEIKQKKDVKYQPNWDSL
DSRPLPGWYDEAKFGIFIHWGVFSVPSYVSEWFWNLWEGPSPHADVVNFMKQNYPPDFTY
PDFAKEFTTEFFDPDDWAEIFEESGAKYIVLTSKHHEGFTNWPSKVSWNWNSMDNGPHRD
LVGELASAIRNKTSIKFGLYHSLFEWFNPLYLADQAANFSTRDYVTGKTVPELYEIVNNY
KPEVVWSDGDIGPVEYWNSTDFLAWLYNESPVKDTVVTNDRWGNGCACHHGGYYTCQDRY
NPGKLQNHKWENCMTIDRRSWGYRRDALLDDYLTIEEILRTFTSTISCGGNMLMNIGPTK
DGIIAPIFQERLRQMGSWLKVNGEAVYSSKPWRSQNDSLTDGIWYTTNNNAVYAFVLSWP
ADNLLKLGSPVSMGSDAKVTMLGWSSPLAWSVAGKELHVTFPDATVSELPCQWAWVVKFE
NFK
Nucleotide sequence
Length: 1,452
>Phfumi.CG.MTP2014.S444.g02070.02.t
CTGGTTATATTCATTGCTGCAAATGAAATATTTGCCAATGAAGAATTTGTTATGAGAGAA
CTCCAAGTTGATTTGGAAAAATCTGGAAATGAAATAGTTACTGGGGAAAAAGTAATTGTT
GAGGAAGTTGAAATTAAACAGAAGAAAGATGTCAAATACCAACCAAATTGGGATTCTCTT
GACTCCCGACCTCTTCCAGGTTGGTATGACGAAGCAAAGTTTGGCATTTTCATTCATTGG
GGAGTTTTCTCTGTTCCAAGTTACGTCAGCGAGTGGTTTTGGAATTTGTGGGAGGGTCCA
TCACCCCATGCTGATGTTGTCAACTTCATGAAGCAAAATTATCCTCCCGATTTTACTTAC
CCCGATTTTGCAAAAGAATTCACAACCGAATTTTTTGACCCAGATGATTGGGCGGAAATA
TTTGAAGAATCCGGTGCAAAGTACATTGTATTGACGAGCAAACATCATGAGGGTTTCACA
AACTGGCCATCAAAAGTTTCGTGGAATTGGAACTCAATGGACAATGGTCCTCATCGGGAT
TTAGTTGGAGAACTTGCAAGTGCGATTCGGAACAAAACTTCAATCAAATTTGGATTATAT
CATTCTTTGTTTGAGTGGTTTAACCCTCTTTATCTAGCTGACCAAGCGGCAAACTTCTCA
ACTCGGGATTATGTGACTGGAAAAACTGTTCCTGAATTGTACGAGATTGTGAATAATTAC
AAACCTGAGGTGGTTTGGTCGGACGGAGATATCGGACCTGTCGAATATTGGAATTCAACA
GATTTCCTCGCATGGCTGTACAATGAAAGCCCAGTGAAGGACACGGTAGTCACAAATGAT
CGATGGGGAAATGGGTGCGCCTGCCATCATGGAGGTTACTACACTTGTCAGGACAGGTAT
AACCCAGGAAAGCTGCAGAACCATAAGTGGGAGAATTGTATGACAATAGACCGACGTTCC
TGGGGTTATCGCAGAGATGCGCTCCTCGATGATTACTTGACCATTGAAGAAATCCTTAGA
ACCTTTACATCGACAATAAGTTGCGGAGGAAATATGTTAATGAACATCGGGCCCACCAAG
GATGGAATAATCGCTCCGATCTTCCAAGAACGCTTGCGACAGATGGGAAGTTGGCTGAAA
GTGAACGGAGAAGCGGTTTACTCGAGTAAACCATGGAGATCACAGAACGACAGTCTCACT
GATGGGATTTGGTACACCACCAATAATAATGCTGTGTATGCGTTTGTGCTTAGTTGGCCT
GCTGATAATTTACTAAAACTTGGTTCCCCAGTTTCTATGGGCAGTGACGCTAAAGTAACG
ATGCTTGGCTGGTCAAGCCCTCTTGCTTGGTCAGTCGCTGGCAAAGAACTTCATGTCACA
TTTCCTGATGCAACAGTTTCCGAGTTGCCATGTCAATGGGCTTGGGTTGTAAAGTTCGAA
AACTTTAAGTAA
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[30-480] 1.0E-124 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[39-481] 1.5E-216 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[46-384] 5.0E-123 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[52-387] 1.12E-115 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[52-430] 1.0E-234 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[109-124] 1.1E-63 - T[148-164] 1.1E-63 - T[167-185] 1.1E-63 - T[235-251] 1.1E-63 - T[262-283] 1.1E-63 - T[337-358] 1.1E-63 - T[370-392] 1.1E-63 |
| ProSitePatterns |
Glyco_hydro_29_CS (IPR018526) - T[302-313] . |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[388-481] 5.3E-12 |
| Pfam |
Fucosidase_C (IPR031919) - T[395-479] 8.0E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 59.54 % | 556 | 0 |
| FUCO_HUMAN | 57.143 % | 533 | 0 |