- Clone 'cien156029' >
- Region 'REG00001111' >
- Clone 'cicl007g16' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4556.g06436.01.t
Possible name(s)
TBX2; TBX4; TBX6
Gene model
Location
S4556 [2,616 / 4,484]
Amino acid sequence
Length: 457
>Phfumi.CG.MTP2014.S4556.g06436.01.p
MTNFQSYPAAPWFQATSETRLEQSVDEVCQKPFQDYQVYDEKYSQVLRTPFDANAQVDLQ
DLEVWDKFSAAKTEMIVTKPGRRIFPGYRVKFSGLDPNAQYCVLMDVVNVDEHRYKFQNG
EWIVSGRGEPKIPQKFYIHPKSPFNGRKLMNEVISFHKVKLTNSFAHSATEKFNVHSMHR
YQLRVHIVRTDDVRMIKHEPMSTFSFRQTTFFTVTAYQNHEVTKLKIANNPFARGFRCDG
GKTKNARRFASDAFENPECDVTQTNKRLKSDPLSNAQHFAATCTGYSSFQPHLSPQATNF
SATCVIAHPDLYPTSHPYSASPNVPNPNASLGYDIGSVSPYSNTGEYSGHNMGNISPQSI
NNSPQFTQQSPHQFSQPSPNISQHSPQQFQSPNNFEGTNFVFPPHNQQTTDDHFSNHFDH
FTPIYPDSNNIFPVSIDENTYVPPNFLPVSFSPACET
Nucleotide sequence
Length: 1,371
>Phfumi.CG.MTP2014.S4556.g06436.01.t
ATGACCAACTTTCAATCTTACCCTGCTGCTCCGTGGTTTCAAGCAACATCTGAAACTCGC
TTAGAGCAGAGTGTTGATGAAGTCTGTCAAAAACCGTTTCAAGATTATCAAGTTTATGAT
GAGAAATATTCGCAAGTGCTTCGAACCCCGTTTGACGCAAATGCTCAAGTCGATCTTCAG
GATCTTGAAGTTTGGGACAAATTTTCAGCGGCGAAAACTGAAATGATTGTCACAAAACCT
GGAAGACGAATCTTTCCTGGTTATCGGGTGAAGTTCTCAGGATTGGATCCAAATGCACAA
TATTGTGTTTTGATGGATGTTGTCAATGTTGACGAACACAGATACAAATTCCAGAATGGC
GAGTGGATTGTGTCTGGACGAGGAGAACCTAAAATTCCCCAAAAGTTTTACATCCACCCG
AAATCACCTTTCAATGGCAGAAAATTGATGAACGAAGTTATTTCGTTCCATAAAGTGAAA
CTTACAAACTCATTCGCACATTCGGCAACCGAGAAGTTTAATGTTCACTCAATGCATCGT
TATCAATTGCGCGTCCACATTGTTCGAACTGATGACGTCAGAATGATCAAGCACGAACCG
ATGTCAACATTTTCGTTTCGACAAACAACATTCTTTACAGTGACGGCATATCAGAACCAT
GAGGTGACCAAACTGAAAATTGCCAACAATCCTTTTGCACGAGGATTTCGATGCGATGGT
GGAAAAACCAAAAACGCGAGACGTTTTGCTTCCGATGCTTTCGAAAATCCCGAATGTGAC
GTAACACAGACGAACAAACGATTGAAATCAGACCCCCTTTCCAACGCACAACACTTTGCT
GCGACTTGCACTGGGTATTCAAGTTTTCAACCTCATCTCTCACCTCAAGCGACCAACTTT
TCAGCTACTTGTGTCATCGCCCATCCGGATCTATACCCTACATCTCATCCATATTCCGCA
TCACCGAATGTTCCTAATCCGAACGCATCATTGGGTTATGATATCGGCAGTGTTTCGCCC
TACAGCAATACTGGAGAATACAGCGGACATAACATGGGAAACATTTCACCTCAGTCCATC
AATAACTCGCCCCAGTTCACCCAACAATCGCCCCATCAGTTTTCCCAGCCCTCACCAAAT
ATCAGCCAACATTCACCACAGCAATTCCAATCACCAAACAATTTTGAAGGAACCAATTTT
GTTTTTCCGCCACACAACCAACAAACCACCGATGATCACTTCTCCAATCACTTTGACCAT
TTTACTCCAATTTATCCGGATTCCAACAATATTTTTCCAGTGTCTATTGATGAAAATACT
TATGTTCCGCCAAATTTTTTACCGGTGTCTTTTTCGCCTGCCTGTGAGACG
| PANTHER |
TF_T-box (IPR001699) - T[40-285] 1.1E-103 |
| Gene3D |
T-box_sf (IPR036960) - T[52-244] 6.4E-76 |
| SMART |
TF_T-box (IPR001699) - T[54-242] 6.8E-94 |
| CDD |
TF_T-box (IPR001699) - T[54-240] 6.37917E-93 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[55-237] 8.57E-65 |
| Pfam |
TF_T-box (IPR001699) - T[57-237] 5.1E-70 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[59-238] 63.576 |
| PRINTS |
TF_T-box (IPR001699) - T[72-96] 5.6E-33 - T[137-150] 5.6E-33 - T[154-163] 5.6E-33 - T[174-188] 5.6E-33 - T[209-222] 5.6E-33 - T[230-238] 5.6E-33 |
| PRINTS |
TF_Brachyury (IPR002070) - T[117-137] 6.0E-6 - T[179-196] 6.0E-6 - T[283-298] 6.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 38.312 % | 199 | 8.2E-59 |
| TBX2_HUMAN | 41.057 % | 203 | 3.34E-58 |
| TBX4_HUMAN | 43.172 % | 198 | 1.93E-57 |