- Clone 'ma199a06' >
- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Clone 'cslv002n02' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4624.g06474.01.t
Possible name(s)
SRSF4; SRSF5; SRSF6
Gene model
Location
S4624 [6,824 / 7,646]
Amino acid sequence
Length: 274
>Phfumi.CG.MTP2014.S4624.g06474.01.p
MSYGPRVYVGRLSHRARESDVERFFRGYGKVRDIMLKNGFGFVEFDDLRDAEDAIHDLNG
RDLCGERVLLEIAKGTPRGAGGAFVSDYVPPMSSRGSRGSYQSNNRGGDSRSSGRQNERG
YRLVIENLSTRVSWQDLKDMMRPYGEVMFADAHHYRKNEGVVEFSSKSDVKRAVEKLEGK
EINGRKIHLVPDFPKSQSRSRSPSADYQDSRSRSRSAEYSPHKKSKRSRSRSESADHNGR
SHSGSASPPKKRASLSTDNRNHSPTPRSRSASPA
Nucleotide sequence
Length: 822
>Phfumi.CG.MTP2014.S4624.g06474.01.t
ATGTCATATGGTCCTCGTGTTTATGTTGGTCGTCTAAGTCACCGGGCTAGAGAGAGTGAT
GTAGAAAGATTTTTCCGTGGCTATGGAAAAGTAAGAGATATAATGTTAAAAAATGGCTTT
GGGTTCGTGGAATTTGATGATTTGCGAGATGCAGAAGATGCCATACATGACCTTAATGGA
AGGGATCTTTGTGGCGAGAGAGTACTGCTTGAAATTGCGAAAGGCACACCAAGAGGTGCT
GGGGGAGCTTTTGTGTCTGACTATGTTCCACCGATGTCAAGCCGTGGAAGTCGCGGTTCT
TACCAGTCCAATAACAGGGGTGGAGATTCTCGCAGTTCTGGCAGACAAAATGAACGTGGC
TACCGTCTCGTCATTGAAAATCTTTCCACAAGAGTTTCCTGGCAAGATCTGAAAGACATG
ATGCGACCTTATGGTGAAGTCATGTTTGCCGATGCACACCATTACAGAAAGAATGAAGGA
GTTGTGGAGTTCAGTTCTAAAAGTGATGTAAAACGTGCTGTGGAGAAGCTGGAAGGCAAG
GAAATTAATGGTCGTAAAATTCATTTGGTACCCGATTTTCCAAAATCTCAATCACGCAGT
CGAAGTCCCAGTGCAGATTACCAAGATAGCAGAAGCAGATCTCGCTCTGCAGAATATAGT
CCTCACAAAAAATCAAAACGATCCAGAAGTCGATCAGAGAGTGCTGATCACAATGGCAGA
TCACACTCGGGAAGTGCAAGCCCACCTAAGAAGCGGGCTTCCTTGTCTACTGACAATCGC
AATCACTCCCCCACACCAAGAAGTCGCTCTGCATCTCCAGCC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-81] 8.2E-19 - T[120-191] 1.1E-21 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[5-75] 16.466 - T[121-189] 12.594 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[6-197] 2.19E-34 |
| SMART |
RRM_dom (IPR000504) - T[6-71] 5.8E-17 - T[122-190] 6.9E-14 |
| CDD |
RRM1_SRSF4-like (IPR035585) - T[6-75] 8.33628E-39 |
| Pfam |
RRM_dom (IPR000504) - T[7-68] 3.0E-15 - T[123-188] 1.3E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF4_HUMAN | 57.949 % | 222 | 1.31E-69 |
| SRSF6_HUMAN | 52.604 % | 194 | 2.73E-60 |
| SRSF5_HUMAN | 54.545 % | 183 | 7.18E-57 |