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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4636.g06484.01.t

Possible name(s)

JAG1; NOTCH2; VWDE

Gene model

Phfumi.CG.MTP2014.S4636.g06484

Location

S4636 [290 / 2,718]

Sequences

Amino acid sequence

Length: 462

>Phfumi.CG.MTP2014.S4636.g06484.01.p
SCECTLGFSGTNCQTANTICNLVCYNQGTCTFDSFGVSSCQCIPPWGGLLCDRPVDNPLC
DAVNCEGDCVCQESCRHEDGYVCVSDLGYLGRLCNIPIPDLECTSDEIVLSVSQLFYAEW
DMNQRNSIIYMSPTVDGEGSNLQQCQAQLVGSSYRIAISHPFTQCGTQTTTEVGTDGYNR
ISFTNALWINKRIATTASYDMPFGIIRFKCVYGNSYTIYTSIRPLIDEPPVITEEQDYQV
SASLCKVSTCNAVCPASLTMQQSAVYTVGQVLHLDFGLTNINNPIVFNNLPVGVETIVDY
VFLSCSSSTPLVSNGLTLQNPQIALFQQGCPTDHGLALQAVMGSSTLNNRACISFRLPRS
KVCAELYIHARLHVCTGVLQQAACPSGAMAPRCTQVRRKRSASADQGGSTNPITIGPIYV
LDKEEGDSHVTFLVDGAEFKMKTNSHRNSTVHDIKKLPKRPQ

Nucleotide sequence

Length: 1,386

>Phfumi.CG.MTP2014.S4636.g06484.01.t
AGTTGCGAATGTACGCTTGGCTTCAGCGGTACCAACTGTCAAACGGCAAACACTATTTGC
AATCTGGTATGCTACAATCAAGGAACCTGCACCTTCGACTCGTTTGGCGTTTCAAGCTGC
CAATGCATTCCTCCTTGGGGCGGGCTGCTTTGCGACAGACCTGTCGATAACCCTTTGTGC
GACGCTGTGAACTGCGAAGGTGATTGCGTGTGCCAAGAATCTTGCCGACACGAGGATGGC
TACGTCTGCGTCTCCGACCTTGGATATCTCGGACGACTTTGCAACATCCCTATACCGGAT
CTGGAGTGCACTTCAGACGAAATCGTCTTGTCAGTGTCTCAGCTCTTTTATGCAGAATGG
GACATGAACCAGCGTAACAGCATTATCTACATGTCGCCTACTGTTGATGGGGAAGGCAGT
AACCTTCAACAGTGCCAAGCTCAACTTGTCGGCTCCAGTTACCGCATCGCAATTTCACAC
CCATTCACACAATGCGGAACCCAAACCACAACTGAAGTTGGCACCGACGGGTACAACCGG
ATTTCGTTTACCAACGCTCTTTGGATCAACAAGAGAATCGCCACCACTGCGTCCTATGAC
ATGCCGTTCGGAATTATTCGCTTCAAATGTGTCTACGGAAACTCTTACACAATCTACACG
TCTATCAGACCGCTCATTGACGAGCCTCCTGTGATCACTGAAGAGCAAGATTACCAGGTG
TCTGCTTCCCTTTGTAAAGTATCGACGTGCAATGCGGTTTGTCCAGCGTCACTCACCATG
CAGCAGTCGGCAGTGTACACGGTCGGACAAGTACTCCACTTAGACTTTGGTCTCACAAAC
ATCAACAATCCAATTGTGTTCAATAATCTTCCTGTCGGAGTCGAAACAATTGTTGACTAC
GTTTTTCTCTCGTGTTCTTCTTCCACACCATTGGTTTCCAATGGGTTGACGCTTCAAAAT
CCACAAATTGCGCTCTTCCAACAAGGATGTCCAACTGACCATGGACTCGCCTTGCAAGCC
GTCATGGGTTCGTCCACACTCAACAACCGGGCGTGCATCTCATTCCGTCTCCCCCGAAGC
AAAGTCTGCGCTGAACTCTACATTCACGCCCGGCTTCATGTTTGCACAGGAGTTCTCCAA
CAAGCGGCTTGTCCCAGTGGCGCAATGGCACCTCGCTGCACACAAGTGAGAAGAAAGAGA
TCCGCTTCAGCAGACCAAGGCGGCTCCACGAACCCAATCACCATTGGCCCGATCTACGTT
CTCGATAAGGAAGAGGGTGATAGTCACGTGACTTTTCTCGTCGACGGTGCGGAGTTTAAA
ATGAAAACCAACAGCCACAGAAATTCCACAGTGCACGACATAAAGAAGCTACCGAAGCGA
CCTCAA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[1-14] 9.882 - T[16-52] 10.914
ProSitePatterns
EGF-like_CS (IPR013032) - T[2-13] . - T[2-13] . - T[40-51] . - T[40-51] .
ProSiteProfiles
ZP_dom (IPR001507) - T[102-391] 14.328

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value