- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4861.g06597.02.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S4861 [3,947 / 6,617]
Amino acid sequence
Length: 454
>Phfumi.CG.MTP2014.S4861.g06597.02.p
MKFAFVLVVVAVCLTSCLGEYKPTWDSLDERPLPAWYDEAKLGIFIHWGVFSVPSFGDGF
LAEWFWYYWKTGNPDAKYFMQKNYRPDFTYADFAPQFTAEFFDANKWADIFEASGAKYVV
LTSKHHEGYTNWPSDSSFNWNSMDVGPKRNIVGEFATAINKKGALRLGLYHSLYEWFNPE
YLEDKKNNFTTDTFVTSKTMPELYYLVNHFKPDIVWSDGDWEASANYWKSKEFLAWLYNK
SPVKETVVTNDRWGIEALCKHGGFLTCSDRYNPGTLQKRKWENAMTIDKGSWGYRRNVDF
NAYMTINELLQQFVVTISCNGNMLMNVGPTKEGTIIPIFEERLRQMGEWLGVNGEAVYSS
RPWKHQNDSRNSDVWYTKNGNHVYAFSFTWPDSGILELGSPVATSQAASITLIGGGSLLT
WEPLSPGGVGIVMPILNPATAKAKWVYVFRLIGF
Nucleotide sequence
Length: 1,362
>Phfumi.CG.MTP2014.S4861.g06597.02.t
ATGAAGTTCGCTTTTGTATTGGTTGTTGTGGCTGTTTGTTTGACTAGCTGTTTAGGCGAG
TACAAGCCGACGTGGGATTCGTTGGACGAGCGACCACTACCTGCATGGTATGACGAAGCG
AAACTTGGCATTTTTATTCATTGGGGAGTGTTTTCGGTGCCTAGTTTTGGAGATGGATTT
CTGGCTGAGTGGTTCTGGTATTATTGGAAAACAGGAAATCCTGATGCCAAATACTTTATG
CAGAAAAACTACCGACCAGATTTTACCTATGCCGACTTTGCACCACAATTTACTGCAGAG
TTCTTTGATGCTAACAAGTGGGCTGACATTTTTGAGGCATCTGGGGCCAAATATGTTGTC
TTAACCAGCAAACATCATGAGGGTTACACAAACTGGCCATCAGATAGCTCTTTCAATTGG
AACTCAATGGATGTTGGACCTAAGCGCAACATTGTTGGAGAGTTTGCTACTGCCATAAAC
AAAAAGGGGGCTCTTAGACTTGGTCTTTACCACTCACTTTATGAGTGGTTCAACCCCGAA
TATCTTGAGGACAAAAAAAATAATTTTACAACTGACACATTTGTGACGTCGAAGACAATG
CCTGAACTTTACTACCTTGTAAATCACTTCAAACCAGATATTGTCTGGTCTGATGGTGAT
TGGGAGGCGAGTGCAAACTACTGGAAGAGTAAAGAGTTTCTTGCATGGCTGTACAATAAA
AGTCCAGTAAAGGAAACTGTTGTGACCAATGACAGATGGGGAATAGAAGCTCTATGTAAG
CATGGGGGCTTCTTGACATGCTCTGATAGATATAATCCTGGAACTTTGCAAAAAAGAAAA
TGGGAGAATGCCATGACCATTGACAAGGGGTCGTGGGGATACAGAAGGAATGTTGACTTT
AATGCATACATGACAATCAATGAGCTGCTGCAGCAATTTGTGGTCACTATCAGTTGCAAT
GGTAATATGCTAATGAATGTTGGTCCAACCAAAGAAGGGACAATCATACCAATATTTGAA
GAGCGACTGCGACAAATGGGTGAATGGCTTGGCGTAAATGGTGAAGCAGTGTATAGCAGC
AGACCATGGAAACATCAGAATGACTCAAGGAATTCTGATGTTTGGTATACAAAGAATGGA
AATCATGTATATGCCTTCAGCTTTACGTGGCCAGATTCTGGGATTCTTGAGCTTGGATCC
CCAGTAGCAACTTCTCAAGCTGCTTCTATTACTTTAATTGGAGGGGGCTCTTTATTAACT
TGGGAACCTTTGAGCCCCGGTGGTGTTGGAATTGTTATGCCTATTCTGAACCCAGCGACT
GCTAAAGCAAAATGGGTGTATGTTTTCCGTCTTATTGGCTTC
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[3-417] 4.9E-124 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[7-451] 7.7E-205 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[19-355] 8.3E-118 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[20-358] 8.0E-111 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[20-401] 6.5E-217 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[79-94] 1.1E-62 - T[118-134] 1.1E-62 - T[165-184] 1.1E-62 - T[205-221] 1.1E-62 - T[233-254] 1.1E-62 - T[308-329] 1.1E-62 - T[341-363] 1.1E-62 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[359-450] 5.7E-7 |
| Pfam |
Fucosidase_C (IPR031919) - T[366-451] 3.2E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 57.241 % | 511 | 4.05E-180 |
| FUCO_HUMAN | 53.563 % | 496 | 4.5E-174 |