- Clone 'ciht035c08' >
- Clone 'cima89818' >
- Transcript 'KH2012:KH.C1.679.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4870.g06606.01.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S4870 [3,375 / 12,459]
Amino acid sequence
Length: 512
>Phfumi.CG.MTP2014.S4870.g06606.01.p
MPYQPSFDRRLPGRIKKYMESSPGVDSRSMADDLQKAFKNDYGRRKKTAFRLLVGQVHKD
ILNSGELSHLNNNVADKKKKRKMMKSQNNSSASCSDEDMRLVEYKDTNLMNKSLSSIYNK
EEQSKETPVPSKQPLPFDPAAPENGWFIDKGPVKNREIVTNKNLKFSNPGSKEHKVDSNN
DNNQSSVTQVNDSDSIIFVDDTKSKSNESKSVQDNSKDDKPASEPDKKSSKVPLKRKKFK
RDSKMEKKKRKTDAKDAEDDFVPPFAQKQFEMKQSDVTFADFAGNESSLKELARLLLHMN
HPEIYSTLGLSPPRGVLLHGPPGCGKTLLGNAIAGQLNMPLLRLAGPELIGGVSGESERR
VREVFETATQNAPCVLFLDEIDAVAQRRENSSKDMERRIVAQLLTCMDELNQGTHQVMVV
GATNRPEMLDTALRRAGRFDREICLGIPDENARTQILQVLCKGLKLADDISYQLIARLTP
GYVGADLLSLCREAAMHAVNRILKVTCSDDVK
Nucleotide sequence
Length: 1,536
>Phfumi.CG.MTP2014.S4870.g06606.01.t
ATGCCTTATCAACCGAGTTTTGACCGACGTCTTCCTGGCCGCATTAAGAAGTACATGGAA
AGCAGCCCGGGAGTTGACAGTAGGTCCATGGCTGATGACTTACAAAAAGCCTTTAAAAAT
GATTACGGAAGAAGAAAGAAAACTGCATTTAGACTTTTAGTTGGGCAAGTTCACAAGGAC
ATTCTTAATTCTGGTGAACTTTCTCATCTAAATAACAATGTTGCGGACAAGAAAAAGAAA
AGAAAAATGATGAAGAGTCAGAACAATTCCAGTGCCTCGTGCTCAGATGAAGATATGAGA
CTTGTTGAATACAAGGACACAAATTTAATGAACAAGTCACTGTCATCAATTTACAACAAG
GAAGAACAATCAAAAGAAACTCCAGTTCCTTCAAAACAACCTTTGCCTTTTGACCCTGCT
GCTCCAGAAAATGGTTGGTTTATTGACAAGGGACCGGTTAAGAACAGAGAAATTGTAACA
AATAAAAACCTAAAATTTTCAAATCCTGGAAGCAAAGAACATAAAGTTGACTCGAATAAT
GATAACAACCAAAGCTCTGTTACACAAGTCAATGACTCTGATTCAATAATATTTGTTGAT
GACACCAAAAGCAAGTCAAATGAATCGAAATCGGTGCAAGATAACTCGAAAGATGATAAA
CCTGCATCTGAGCCAGATAAAAAATCATCTAAAGTTCCGTTAAAAAGAAAAAAGTTCAAA
CGGGATTCTAAAATGGAGAAAAAGAAAAGAAAAACTGACGCGAAAGATGCAGAAGACGAT
TTCGTTCCCCCGTTTGCTCAGAAACAGTTCGAGATGAAACAATCTGATGTAACATTTGCA
GATTTTGCTGGAAATGAATCATCCTTGAAAGAACTTGCTCGCCTGCTGTTACACATGAAT
CATCCTGAAATATACAGCACCCTAGGGCTGTCCCCTCCCCGTGGGGTCTTGCTTCATGGG
CCCCCAGGGTGTGGAAAGACCCTGTTGGGAAATGCTATAGCCGGCCAGTTGAACATGCCT
CTGCTGCGATTGGCTGGACCTGAGCTGATCGGGGGCGTGTCGGGAGAGAGTGAGAGGCGT
GTCAGGGAAGTTTTTGAGACAGCGACACAAAATGCTCCGTGTGTTTTGTTCTTGGATGAA
ATAGATGCTGTGGCGCAGAGACGCGAAAACTCATCCAAAGACATGGAACGACGCATTGTG
GCGCAACTGTTGACTTGTATGGACGAGTTGAACCAAGGCACGCATCAAGTCATGGTGGTA
GGGGCAACGAATCGACCGGAGATGCTTGACACGGCGTTAAGAAGAGCTGGAAGGTTTGAT
CGTGAAATATGTCTGGGTATTCCTGATGAAAATGCCAGAACACAGATACTGCAAGTGCTT
TGCAAAGGCCTCAAGTTGGCAGATGACATCAGCTATCAATTGATTGCTCGGTTGACCCCA
GGATATGTCGGAGCCGACCTTTTGTCACTTTGCCGAGAGGCCGCCATGCACGCAGTCAAC
CGTATCTTGAAGGTCACGTGTTCTGATGACGTCAAA
| Gene3D |
NLV2_N_sf (IPR038100) - T[3-69] 3.4E-14 |
| Pfam |
NVL2_nucleolin-bd (IPR031996) - T[8-65] 1.0E-14 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[275-501] 3.16E-60 |
| SMART |
AAA+_ATPase (IPR003593) - T[312-449] 6.5E-20 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[316-445] 5.6E-43 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[417-435] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 43.038 % | 194 | 1.2E-53 |
| TERA_HUMAN | 45.188 % | 228 | 3.77E-66 |
| NVL_HUMAN | 43.289 % | 390 | 9.13E-127 |