- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S48.g00648.01.t
Possible name(s)
DDX39B
Gene model
Location
S48 [26,741 / 29,490]
Amino acid sequence
Length: 427
>Phfumi.CG.MTP2014.S48.g00648.01.p
FKLNTIMTDADILLDYEEDEHETTNDLVPGKDQKKDVKGTYVSIHSSGFRDFLLKPELLR
AIVDCGFEHPSEVQNECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLV
MCHTRELAFQISKEYERFSKYMSTIKVAVFFGGLPITKDQATLKSNCPHIVVGTPGRLLA
LIRSNSLNLKNIKHFILDECDKMLEQLDMRRDVQDIFRLTPHEKQVMMFSATLSKDIRPV
CKKFMQDPMEVYVDDEAKLTLHGLQQHYVKLKDNEKNRKLFDLLDALEFNQVVIFVKSVQ
RCMALAELLKEQNFPAIDIHRAMNQEERLSRYQLFKNFERRILVATNLFGRGMDIERVNI
VFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVTELPDEI
DISAYSK
Nucleotide sequence
Length: 1,281
>Phfumi.CG.MTP2014.S48.g00648.01.t
TTCAAACTAAACACAATCATGACTGATGCTGATATTCTGTTAGACTATGAGGAAGATGAA
CACGAAACCACCAATGATTTAGTACCAGGGAAAGACCAGAAGAAAGATGTGAAGGGAACG
TATGTGTCCATTCACAGCTCTGGTTTTCGAGATTTCCTTCTTAAACCAGAACTACTTAGG
GCCATTGTGGACTGTGGTTTTGAACATCCTTCTGAAGTTCAAAATGAGTGTATCCCACAA
GCTGTGCTTGGCATGGATGTGCTGTGTCAAGCAAAATCTGGAATGGGTAAAACAGCAGTT
TTTGTGCTGGCAACATTACAACAACTGGAACCTGTTGATGGCCAGGTTTCAGTCTTGGTA
ATGTGCCACACACGAGAATTGGCTTTCCAGATAAGCAAGGAATATGAAAGGTTTTCCAAG
TACATGTCCACTATAAAGGTTGCAGTGTTTTTTGGTGGCCTTCCCATCACTAAAGACCAA
GCAACATTAAAAAGCAATTGCCCCCATATAGTTGTTGGTACACCTGGACGTCTGCTTGCT
CTTATCCGATCAAACTCATTAAACCTGAAAAATATCAAGCACTTCATTTTGGATGAATGT
GATAAAATGCTGGAACAACTAGACATGCGTCGTGATGTACAAGACATCTTTCGTTTGACC
CCTCATGAGAAGCAAGTGATGATGTTTAGTGCAACGCTGAGCAAAGATATTCGTCCAGTT
TGCAAGAAGTTCATGCAAGATCCGATGGAGGTGTATGTTGATGATGAAGCAAAGCTTACT
CTGCATGGACTTCAACAACATTATGTCAAGCTCAAGGACAATGAGAAGAACAGGAAATTG
TTTGATTTGCTCGATGCCCTTGAGTTCAACCAGGTTGTCATCTTTGTTAAGTCTGTACAA
AGATGCATGGCTTTGGCTGAGCTCCTAAAGGAACAAAACTTTCCAGCTATCGACATTCAC
AGGGCCATGAACCAAGAGGAGCGTCTTAGCAGATACCAACTTTTCAAGAATTTCGAGCGC
CGTATCTTGGTTGCAACTAACCTGTTTGGAAGAGGCATGGACATTGAAAGGGTCAACATT
GTTTTTAACTATGACATGCCAGAGGATTCTGATACGTACCTTCACAGGGTTGCTCGTGCG
GGAAGATTTGGCACCAAAGGCCTGGCAATTACCTTTGTATCTGATGAAACAGATGCCAAA
ATTTTAAATGATGTCCAGGACCGCTTTGAAGTCAACGTAACTGAACTGCCTGACGAAATC
GACATCTCTGCATACAGTAAG
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[47-75] 9.45 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[66-267] 2.4E-53 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[72-237] 1.5E-38 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[78-251] 27.51 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[116-399] 4.59E-64 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[263-424] 21.484 |
| CDD |
Helicase_C (IPR001650) - T[266-392] 1.98155E-36 |
| Pfam |
Helicase_C (IPR001650) - T[276-384] 2.1E-23 |
| SMART |
Helicase_C (IPR001650) - T[303-384] 3.9E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 37.26 % | 254 | 8.56E-81 |
| DX39B_HUMAN | 86.603 % | 748 | 0 |
| DX39A_HUMAN | 83.649 % | 736 | 0 |