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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'
  2. Transcript 'Phfumi.CG.MTP2014.S1...'
  3. Transcript 'Phfumi.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S4.g00096.02.t

Possible name(s)

ABCF1; ABCF2; ABCF3

Location

S4 [164,079 / 173,510]

Sequences

Amino acid sequence

Length: 677

>Phfumi.CG.MTP2014.S4.g00096.02.p
STTYILIHIEMPSEAAKRRAQKKKEAAKNRQRPNKKNAESTEVNGDTNDEVNGLPINSLK
IETPNIDKEARSCTGVLASHLISSDLHIYNYSCTYHGQVLFQDTNLELNAGNRYGLIGAN
GCGKSTMLATLGGREVPIPDHIDSFHLQHEAPSIEKTPLEFVLECDDERHRLEEEAERIM
HIDPDSDELMKIYERLDELGAETAEVQAARILHGLGFTGEMQQKHLSDFSGGWRMRVSLA
RALFLKPYLLLLDEPTNHLDLDACVWLEEELKKFKHILVLISHSQDFLNGVCTRIIFMNE
KKLHYYTGNYDAFIRTRAELEENQMKRYKKEQDEINHMKDYIARFGHGSAKLARQAQSKE
KTLAKMIEKGLTQKVRSDSSFSFYFPDCSPLAPPVLMVQKISFRYSDDTPWIYRDVEFGV
DMDTRLALVGPNGAGKSTLLKLITGELSPTDGIIRRHSHLKIARYHQHLQDLIDISLTPV
EYMAKCYPEVKDMEKLRKLVGRYGITGKQQLGPISKLSDGQKCRVVFAWLSSQYPNMLLL
DEPTNHLDIETIDSLAEAINEFNGGMILVSHDFRLINQVAKDIWICENQTVTPWKGGIQA
YKQSLKKKVINHEKKILKGRSADHAMTNGKAAPVWKPAAVSKPQNNIVGFVMPKAVKKSA
ANDSKDSAAQDLWDYSN

Nucleotide sequence

Length: 2,034

>Phfumi.CG.MTP2014.S4.g00096.02.t
TCCACTACTTACATTCTTATTCATATTGAAATGCCCTCCGAAGCAGCAAAACGTAGGGCA
CAGAAGAAGAAAGAAGCCGCAAAAAATCGTCAACGTCCAAACAAGAAAAATGCAGAATCA
ACAGAAGTCAATGGTGACACAAATGACGAAGTCAATGGATTACCTATAAACTCACTGAAA
ATTGAAACTCCTAATATTGACAAAGAAGCTCGATCATGTACTGGGGTTCTTGCCTCGCAC
CTTATATCATCCGATCTTCACATTTACAACTATTCTTGCACTTATCACGGACAGGTGCTC
TTTCAAGACACAAATTTGGAATTAAATGCTGGAAATCGATATGGATTGATTGGAGCTAAT
GGATGTGGCAAGTCTACCATGTTGGCAACACTAGGTGGCAGGGAAGTGCCTATTCCAGAC
CACATCGACAGTTTTCACCTACAGCATGAAGCACCATCCATTGAAAAAACTCCACTGGAG
TTTGTTTTGGAGTGTGATGATGAGCGGCATCGATTGGAAGAAGAAGCAGAGCGGATCATG
CATATTGATCCTGACAGTGATGAGTTGATGAAAATCTATGAGAGGTTGGATGAGTTGGGA
GCAGAAACTGCTGAAGTACAAGCTGCAAGAATCCTGCATGGTCTCGGATTTACCGGCGAA
ATGCAGCAGAAGCACTTGTCTGATTTCTCTGGTGGTTGGAGGATGCGAGTCTCCCTTGCA
AGAGCTCTGTTTCTAAAACCATATCTTCTTCTACTGGATGAACCGACCAATCATCTTGAC
CTCGATGCATGTGTGTGGCTGGAGGAGGAACTTAAAAAATTCAAGCACATTCTAGTGCTT
ATTTCGCACTCCCAGGATTTCCTTAATGGTGTTTGCACAAGAATTATTTTTATGAATGAA
AAGAAACTGCATTATTACACGGGAAACTATGATGCATTCATTCGTACTCGAGCAGAGTTG
GAAGAAAATCAAATGAAGCGATACAAGAAAGAACAAGATGAAATAAATCATATGAAAGAC
TACATTGCACGTTTTGGACATGGCAGTGCAAAACTTGCTCGTCAAGCACAGAGCAAAGAG
AAGACTTTAGCTAAAATGATTGAGAAAGGTCTTACACAAAAAGTTCGTTCAGATAGTTCC
TTTTCTTTTTACTTCCCTGATTGCAGCCCTCTTGCGCCTCCAGTGTTAATGGTACAAAAG
ATTAGTTTCAGATATTCTGATGACACGCCTTGGATTTATCGTGATGTTGAATTTGGAGTT
GATATGGACACTCGTCTTGCGTTGGTTGGGCCAAATGGTGCTGGAAAATCCACCCTACTC
AAACTCATAACTGGAGAGTTAAGCCCAACAGATGGAATTATTCGAAGGCACAGTCACTTG
AAGATTGCCAGATATCATCAACATCTGCAAGATTTAATTGACATCAGTCTTACACCAGTG
GAATACATGGCAAAATGTTATCCTGAGGTGAAGGACATGGAAAAGTTAAGGAAATTAGTA
GGAAGATATGGAATCACAGGAAAACAACAGCTGGGACCAATCAGTAAGCTATCTGATGGA
CAAAAATGTCGTGTAGTATTTGCATGGCTCTCATCGCAATATCCAAACATGCTCTTGCTG
GACGAACCTACTAACCATCTTGATATTGAAACTATTGACTCACTTGCTGAGGCAATCAAT
GAATTTAATGGCGGAATGATCCTTGTGTCCCACGACTTCAGGCTTATAAACCAGGTTGCA
AAGGATATTTGGATTTGTGAAAACCAAACTGTCACCCCATGGAAAGGTGGAATACAGGCC
TACAAACAGTCGCTCAAGAAGAAAGTCATAAACCATGAGAAAAAGATTTTAAAGGGCAGA
AGTGCAGATCATGCGATGACGAATGGAAAAGCCGCCCCAGTGTGGAAACCAGCAGCCGTA
AGCAAACCGCAAAATAACATCGTTGGTTTTGTGATGCCAAAAGCGGTCAAAAAATCTGCA
GCAAATGATTCCAAGGACAGTGCTGCTCAGGATCTGTGGGATTACAGCAACTAG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[78-326] 1.12E-42 - T[377-594] 6.05E-40
ProSiteProfiles
ABC_transporter-like (IPR003439) - T[86-325] 14.639 - T[396-613] 14.819
Pfam
ABC_transporter-like (IPR003439) - T[102-257] 5.3E-23 - T[414-545] 4.9E-22
SMART
AAA+_ATPase (IPR003593) - T[110-307] 2.3E-7 - T[422-590] 1.2E-6
ProSitePatterns
ABC_transporter_CS (IPR017871) - T[229-243] .
Pfam
ABC_tran_Xtn (IPR032781) - T[298-381] 3.8E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ABCF2_HUMAN 64.725 % 808 0
ABCF3_HUMAN 40.449 % 410 2.87E-134
ABCF1_HUMAN 40.734 % 359 4.0E-113