Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,208

>Phfumi.CG.MTP2014.S528.g02253.02.p
MERYNKRPNFRQMKLENVSVALKFLERERIKLVSIDSKAIVDGNLKLILGLVWTLILHYS
ISMPMWDDEDEEEEKAQATPKQRLLGWIQNKIPQMPITNFKNNWQDGIALGALVDNCAPG
LCPDWEDWNPEDGKDNAAEAMKLADEWLGVPQVITPEEITNPNVDELSVMTYLSQFPKSK
LKPGAPLRPKTNSKKARAYGKGVEPTGLKVGQTAPFTVETISAGSGELLVYLTDPDGHKQ
ELKPVPNNDKLKTFSVTYFPTIAGEYKVEVLFAGSGIQKSPFLVDVEDSPVDVSRVVAKG
PGLQPGNVINAPTHFDVFTEGAGVGHVDVVIENPTGCQKSVVPSIKPVSENVYRVTYTPE
KNGPHRVHVMFAEEAIPKSPFEVTISMPFNPAAVWAEGNGVNPEGLMIRQNAEFLVHTEK
AGDGKLEVKCIGPNGVTELVNVQDNGDGTYSCDYYPLKPGQYVIGVTYSGKPASKSPYKV
YVSSPPDPSKVKVQGPGVEPGNVVGDPTYFDVLTSDSGKGNVEVTLVGPNGEKDVIPVQL
ESRGNDVIRGTYTPQQAGPHKLYVEFAGQPVPKSPYLVDISPSFSANACRAYGRGIQPTG
VRMREKAEFHVSVENAGDADLKASVKGPRGNEPVTVKKSSKPNVYDCEYYPLKAGDHTVS
VTYGGNPIARSPFQVAVGNEAGPQKVRAYGPGLHEGKVGHSADFVVETTGSDVGQLGFSI
EGPSQAQIDCEDRGDGSCDVKYYPTEAGEYAVHVICDDNDIKGSPFMAQVQPADAKTNPD
KVKAFGPGLKSGEPVCGHPTAFTVDARHAGDKAPVDVYAKTAEGEDIPIKIKDNHDGTYE
CSYSPQKPIKHTIIPSYDGVAVKDSPFRVAVQEDSYPDKVKVYGPGVESGLKAEEPTYFT
VDCSKAGLGDVSIGIKCAAGVIAPTERDVEFEIIKNEASDTFTVKYTPPGAGEHTIMALF
ADKKVPNTPIVVNVASSHNAKRVRAEGPGIEPDEAQCGVPTKFTIFTRGAGKAKPDVQFK
PARGSYRAPVKEPEIIDNKDDTYTVNYTPHSDGPMDVDVTYGGDRIPNSPFPVNVAPQLD
VNQVKVKGLDEKMDVGEPKVFDVLTAGAGGKGKLDVDVISPSKLPVHCHEKDIPRGKAIS
FTPEEEGPYEIDVKYDDVPVNGSPFTVEALVPPDASKVRAYGPGLSEGVVGKSAPFTIET
KDAGKTRF

Nucleotide sequence

Length: 5,142

>Phfumi.CG.MTP2014.S528.g02253.02.t
ATGGAGCGCTACAACAAGCGTCCCAACTTCAGGCAAATGAAATTGGAAAACGTCTCTGTG
GCTTTAAAGTTTTTGGAAAGGGAGAGGATTAAGCTTGTCAGCATTGACAGCAAAGCTATA
GTGGATGGAAATCTGAAGTTGATTCTTGGTTTGGTATGGACACTCATTCTCCATTATTCC
ATATCTATGCCCATGTGGGATGATGAAGACGAGGAGGAAGAAAAGGCTCAAGCTACACCC
AAACAACGCTTGCTTGGTTGGATTCAAAACAAAATTCCGCAAATGCCCATTACAAACTTC
AAAAACAACTGGCAGGATGGTATAGCATTAGGTGCTTTGGTGGACAACTGTGCCCCAGGA
CTGTGCCCCGATTGGGAAGATTGGAATCCTGAAGATGGTAAGGACAATGCAGCCGAAGCC
ATGAAGCTTGCAGATGAGTGGCTTGGCGTTCCACAGGTTATCACGCCTGAGGAAATCACC
AACCCCAATGTAGACGAACTGAGTGTGATGACATATCTCTCCCAATTTCCCAAATCAAAG
CTGAAGCCAGGAGCACCTCTCAGACCAAAAACTAACTCTAAAAAAGCTCGTGCATATGGA
AAAGGGGTGGAGCCAACTGGACTGAAAGTTGGCCAGACTGCTCCATTCACTGTTGAAACT
ATCTCGGCCGGAAGCGGTGAGCTATTAGTCTATTTGACCGATCCAGATGGACATAAACAG
GAATTAAAACCTGTTCCCAACAACGACAAGCTAAAAACATTCTCCGTTACATATTTTCCT
ACGATTGCTGGAGAATACAAGGTGGAAGTTTTGTTTGCTGGAAGTGGAATTCAAAAGAGT
CCTTTTCTGGTGGACGTCGAAGATTCTCCTGTAGATGTAAGTCGTGTTGTTGCCAAGGGT
CCTGGACTTCAACCTGGAAATGTTATCAACGCCCCTACCCACTTTGACGTATTTACTGAA
GGCGCCGGTGTTGGGCATGTGGACGTGGTAATTGAGAATCCAACTGGCTGTCAAAAGTCT
GTGGTGCCAAGCATTAAGCCAGTGTCAGAAAACGTCTACCGAGTTACTTACACACCCGAA
AAAAATGGTCCACACCGCGTCCACGTTATGTTTGCTGAAGAAGCTATTCCGAAGAGCCCG
TTTGAAGTGACCATTTCCATGCCGTTTAATCCTGCAGCTGTTTGGGCCGAGGGGAATGGA
GTGAACCCAGAAGGTTTGATGATTCGTCAAAACGCCGAATTTCTGGTTCACACTGAAAAA
GCGGGAGATGGGAAACTGGAAGTAAAATGTATTGGTCCAAATGGAGTAACTGAATTGGTG
AATGTACAAGATAACGGCGATGGAACTTATTCTTGCGATTACTACCCACTTAAACCAGGA
CAGTACGTCATAGGTGTAACATACAGCGGCAAGCCAGCTTCGAAAAGCCCGTATAAGGTT
TATGTTTCATCCCCACCGGACCCCAGTAAAGTCAAAGTTCAAGGACCTGGAGTGGAACCA
GGAAATGTTGTGGGAGATCCTACTTATTTTGATGTACTTACTTCCGATTCTGGGAAAGGA
AATGTTGAGGTGACATTAGTAGGTCCGAACGGGGAAAAAGATGTCATTCCAGTGCAATTA
GAAAGCCGGGGAAATGATGTCATTCGTGGCACCTACACACCACAGCAAGCCGGTCCACAC
AAACTATACGTGGAATTTGCCGGCCAGCCTGTGCCGAAAAGTCCGTATTTGGTCGACATA
AGTCCATCATTCAGCGCAAACGCTTGCCGAGCTTACGGACGCGGAATCCAACCAACAGGG
GTGCGAATGCGAGAAAAAGCAGAATTCCATGTATCTGTAGAAAATGCTGGTGACGCTGAT
CTGAAAGCGTCAGTTAAAGGCCCACGGGGTAATGAGCCGGTCACTGTTAAAAAGAGTAGC
AAGCCTAACGTGTACGATTGCGAATATTACCCACTGAAAGCGGGCGATCACACTGTTTCG
GTCACTTACGGAGGAAATCCCATTGCAAGAAGTCCTTTCCAGGTTGCGGTGGGAAACGAA
GCAGGGCCACAGAAAGTGCGGGCGTATGGTCCTGGATTGCACGAAGGAAAAGTTGGTCAT
TCAGCCGACTTTGTTGTTGAGACAACTGGAAGCGATGTTGGTCAGCTTGGCTTTTCGATC
GAGGGCCCCTCTCAAGCTCAAATAGATTGTGAGGATCGCGGTGACGGTTCGTGTGATGTC
AAATATTATCCCACCGAAGCTGGTGAATACGCGGTGCACGTCATATGCGATGACAACGAC
ATTAAAGGATCACCTTTTATGGCACAGGTTCAACCAGCGGATGCCAAAACAAACCCAGAC
AAGGTGAAAGCGTTTGGTCCTGGTTTGAAAAGTGGTGAACCAGTATGCGGTCACCCCACT
GCATTCACTGTGGACGCACGCCATGCAGGTGATAAAGCACCGGTTGATGTTTATGCCAAA
ACTGCTGAGGGTGAAGATATCCCAATAAAGATCAAGGATAATCACGACGGAACTTACGAG
TGTTCGTATTCCCCTCAAAAACCAATTAAACACACAATTATTCCATCGTACGATGGTGTG
GCTGTGAAGGATTCTCCATTTAGGGTTGCGGTTCAAGAAGATTCCTACCCTGACAAGGTG
AAGGTGTATGGACCCGGAGTTGAATCAGGTCTCAAGGCGGAGGAACCGACATATTTTACA
GTGGATTGTTCCAAAGCGGGCTTGGGCGATGTTAGCATTGGTATTAAGTGTGCAGCGGGG
GTGATTGCACCAACTGAACGTGATGTGGAGTTTGAAATCATTAAAAACGAAGCATCAGAT
ACATTTACTGTCAAATATACACCACCCGGTGCAGGGGAACATACTATTATGGCTTTATTT
GCTGACAAAAAAGTTCCAAACACACCTATAGTGGTAAATGTTGCATCATCGCACAACGCT
AAGCGTGTGCGAGCTGAAGGACCAGGAATTGAACCAGACGAGGCCCAGTGTGGGGTACCG
ACTAAATTTACTATTTTTACCCGTGGAGCTGGAAAAGCAAAACCAGATGTTCAATTTAAA
CCTGCACGTGGATCATACCGAGCCCCGGTCAAGGAGCCTGAAATTATTGACAACAAGGAT
GATACGTACACAGTGAATTACACACCGCATTCAGACGGCCCTATGGACGTTGATGTAACT
TATGGTGGTGATAGAATTCCAAATAGCCCCTTTCCAGTAAATGTGGCTCCTCAACTTGAT
GTTAATCAAGTAAAAGTGAAAGGACTGGACGAAAAGATGGACGTTGGAGAGCCAAAAGTA
TTCGATGTCCTCACAGCTGGTGCTGGTGGAAAAGGAAAACTGGACGTTGACGTTATTTCA
CCGTCCAAACTTCCCGTACATTGTCATGAAAAGGATATTCCGCGCGGAAAAGCGATTTCC
TTTACCCCTGAAGAAGAAGGTCCTTATGAGATTGACGTAAAATATGACGATGTCCCTGTA
AATGGAAGTCCATTTACCGTAGAGGCTCTGGTTCCTCCTGACGCCAGCAAAGTCAGGGCG
TACGGACCAGGGTTGTCTGAAGGTGTAGTTGGAAAATCAGCTCCTTTTACCATTGAAACA
AAAGATGCAGGTAAAACCCGTTTTTGAAATGGTGCAGGAAAATCTGTACCAGAATAAAAA
TGTATGGTTGATTTAGGAAATGGTGGCCTTGGCTTAACTGTTGAAGGACCTTGTGAAGCA
AAGATCGAATGCATCGATCAGGGTGATGGCTCCTGTTCTGTTTCATATCTACCTACTGAA
CCTGGTGACTATAAGATCAACGTTCTGTTTGCTGATGAACACATTCCTCATTCACCGTTC
AACGCTGTGATCAAGCCACAGTTCGATGCATCTAAAGTTGAAATGGTCGGTCCGGGTTTG
GAAAGTGGCAAAGTCGGAACTCCAAGTCACTTTGACGTCGATTGCACAAACGCTGGAGAA
GCTCCTCTTTCCGTTGAAGTCTTCAATGACGACGGATCTTCTGTTCCAGTAAAAGTCAGA
GATAATGGTGACGGAACCCACAGTGTTACATTCGTACCCGACAAGCCTGGCAAGGAAGTC
GTGCATGTTGCATACGGAGGCGTTGGCGTTCCCAAGTCTCCAAAAACCGTCGACGTGAAA
CCCGATATCGATACCAGCAGTATTAGCACATACGGTCCAGGCGTTGACCGCGAAGGTGTC
CTGGCTGATGTCGACACAACATTTACGGTGGATGCTTGCTCGCTTGCGCCGCGTGGTGGA
GATCACATTAAGGCAAATGTAATTGCTCCGAACGGTATCTCTCATCCAGCAGAGGTCATC
GACAATGACGTAGGAACATACACCGTGAACTACACGCCCATTGAAAAGGGAACACACGAA
GTGGTAGTGACGTATGACGACGTTCCGGTTCCCGGTTCACCGTTTCCGGTTGACGTTGAT
GAAGGCTGTGATCCCAGTAAAGTTCGTGCGCATGGCCCAGGCCTTGAGAAAGGGACAACA
AACAAACCGGCCAAATTTACAGTGGATACTCGTGGAGCAGGAACTGGAGGTCTCGGTTTG
GCTATTGAAGGTCCATCAGATGCCAAGATTACATGCACGGACAGTAAGAATGGAACTTGT
GCTGTTGAGTATTTTCCAACTGCCCCTGGTGATTATGAAGTCAACATAACATACGGCGGC
GAAAACATACCTGGTTCTCCATTTCTTGTGTCAGTTAAAGACGTGGTTGATCCTTCAAAG
GTTGAATGCAAAGGTCCCGGACTATCTCCTGGTGTTCGGGCAAATATTCCACAGAAATTT
GAGGTCGACTGCACCAAAGCTGGGGTTGCACCTCTTCAAGTTGCTGTAAAGGGCCCAAGA
GGCATCAAGGAAGATGTTGACATCGTTGACAATAACGACGGCACGTACACAGTTGGATAC
ACACCAAGTAAGGAAGGATCGTATCAGGTCCAAGTGCAATATGCTGATGAAGAAATCCCC
CGTAGCCCATACCGTATTCGTGCACAACCGACCCACGATGCAAGCAAGGTGAAATGCACT
GGACCAGGCGTAGCTACAAGCGGAGTACCTGCTTCTCTTCCCGTGGAGTTTAACATTGAC
GCGACAGACGCAGGAGACGGCGTGCTTGCCGTTCAAATCACG

InterProScan

CDD	CH-domain (IPR001715) - T[1-59] 1.11886E-11 - T[80-176] 2.16282E-17
Gene3D	CH_dom_sf (IPR036872) - T[1-64] 1.7E-20 - T[65-181] 3.9E-40
ProSiteProfiles	CH-domain (IPR001715) - T[1-60] 13.688 - T[78-181] 19.936
SUPERFAMILY	CH_dom_sf (IPR036872) - T[3-176] 3.13E-54
PANTHER	FLNB (IPR029874) - T[3-503] 0.0 - T[487-1205] 0.0
Pfam	CH-domain (IPR001715) - T[7-60] 2.2E-7 - T[79-176] 1.3E-14
ProSitePatterns	Actinin_actin-bd_CS (IPR001589) - T[32-56] .
SMART	CH-domain (IPR001715) - T[80-176] 1.1E-20
Gene3D	Ig-like_fold (IPR013783) - T[187-286] 1.8E-26 - T[289-390] 1.0E-25 - T[391-484] 2.2E-26 - T[485-585] 1.1E-26 - T[586-680] 1.6E-28 - T[681-776] 2.7E-34 - T[777-873] 3.5E-27 - T[874-978] 8.1E-27 - T[979-1082] 6.3E-28 - T[1083-1169] 4.9E-19 - T[1170-1208] 1.3E-8
ProSiteProfiles	Filamin/ABP280_repeat-like (IPR017868) - T[188-286] 27.322 - T[288-385] 28.596 - T[386-482] 29.027 - T[483-580] 30.815 - T[581-677] 27.507 - T[678-770] 29.767 - T[774-871] 26.931 - T[872-974] 25.0 - T[975-1075] 27.712 - T[1076-1169] 23.972 - T[1170-1208] 13.41
SUPERFAMILY	Ig_E-set (IPR014756) - T[189-288] 8.01E-22 - T[291-385] 1.2E-21 - T[389-485] 9.81E-24 - T[466-584] 4.45E-28 - T[584-679] 4.0E-21 - T[660-772] 5.54E-32 - T[777-873] 6.01E-23 - T[857-979] 1.47E-24 - T[959-1081] 6.67E-26 - T[1058-1169] 4.8E-23 - T[1152-1205] 8.41E-12
SMART	Filamin/ABP280_rpt (IPR001298) - T[192-289] 3.3E-25 - T[292-388] 1.4E-29 - T[390-485] 1.3E-28 - T[487-583] 5.1E-32 - T[585-680] 7.2E-29 - T[682-773] 2.7E-32 - T[778-874] 3.6E-27 - T[876-977] 4.0E-19 - T[979-1078] 4.7E-23 - T[1080-1172] 1.0E-22
Pfam	Filamin/ABP280_repeat-like (IPR017868) - T[192-282] 4.0E-10 - T[291-382] 2.6E-15 - T[389-479] 1.4E-14 - T[486-576] 3.2E-16 - T[585-674] 2.0E-11 - T[682-766] 1.4E-15 - T[777-868] 6.7E-17 - T[877-970] 2.3E-11 - T[979-1071] 1.1E-15 - T[1080-1166] 3.5E-8