- Molecular Tool 'Zinc Finger (BTB/POZ)-MO' >
- Transcript 'KH2012:KH.C8.356.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5296.g06852.01.t
Possible name(s)
NOTO; VAX1; VAX2
Gene model
Location
S5296 [5,989 / 7,318]
Amino acid sequence
Length: 368
>Phfumi.CG.MTP2014.S5296.g06852.01.p
VNRSRFSEEEEMLPFVPFMKQRTPQMLQKQQDESCTSDEVSDCSSTVSPFSGESDSLVRS
LSTSWSSGSASPGLSCSASSTKPRSSLVGHENVDKHRKAKKRSLFTIDAILADDKPKNVD
YKLKRVSEISNERPAKLPRLAQAIPARSVYDFSNTKPAASPVASQPNEAMQAYFQQYFQK
IATLAYQSPSAAMPTKFAHGLPTPPITPIGNAWFPAVSSAGVSPVFIPSTTPMNLLTPMT
AQAHRASGHISPLSNLQTPENRSNISSDTSNEGKNKRNRTVFTAEQLQCLESEFEKQHYM
VGSERYFLARRLNLNEAQVKVWFQNRRIKWRKQKNQSVGELASPEASAQPDKKTNFQLLR
EQAVTATY
Nucleotide sequence
Length: 1,104
>Phfumi.CG.MTP2014.S5296.g06852.01.t
GTTAACAGAAGCCGATTTAGCGAAGAAGAAGAGATGTTACCATTTGTGCCATTTATGAAA
CAAAGGACACCACAAATGCTGCAAAAACAGCAGGACGAAAGCTGCACATCAGATGAAGTT
AGCGATTGCAGTTCTACCGTTTCGCCGTTTTCTGGTGAAAGCGACAGTCTCGTGCGTTCT
CTATCGACGTCGTGGTCATCTGGATCTGCATCACCAGGTCTCTCCTGCTCCGCTTCATCC
ACAAAGCCAAGATCAAGTCTCGTGGGACATGAGAACGTGGATAAACATAGGAAAGCGAAG
AAGCGTTCTCTTTTTACAATCGACGCCATTTTGGCTGACGACAAACCCAAAAATGTGGAT
TACAAACTGAAGCGAGTGTCGGAGATTTCAAATGAACGTCCGGCCAAGCTGCCTCGTCTT
GCCCAAGCAATCCCAGCGAGGAGTGTCTATGACTTCTCCAACACCAAGCCAGCAGCTTCG
CCAGTTGCCTCACAGCCAAACGAGGCCATGCAAGCATATTTTCAGCAGTATTTCCAGAAA
ATTGCAACACTCGCTTACCAGTCGCCAAGCGCCGCTATGCCCACTAAGTTTGCGCATGGC
CTCCCGACACCACCGATAACTCCAATTGGCAACGCGTGGTTCCCTGCCGTATCTTCAGCG
GGAGTGTCACCTGTGTTTATTCCAAGTACAACTCCCATGAACCTTTTAACTCCAATGACA
GCTCAAGCACACCGCGCTTCTGGTCACATTTCACCTCTATCCAATCTCCAAACCCCCGAA
AACAGATCCAACATTTCGTCGGACACGAGCAACGAAGGCAAAAACAAACGCAACAGAACA
GTTTTTACTGCCGAGCAGCTGCAATGCTTGGAAAGCGAATTTGAAAAGCAGCACTACATG
GTGGGGTCGGAGCGTTATTTCTTGGCACGTCGTCTAAACCTTAATGAAGCTCAGGTAAAA
GTTTGGTTCCAAAATCGACGCATCAAATGGCGCAAGCAGAAAAACCAGTCCGTTGGTGAA
CTTGCATCTCCTGAAGCCTCTGCTCAGCCCGACAAGAAAACAAATTTCCAGCTTTTACGT
GAGCAAGCAGTGACTGCAACGTAC
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[268-337] 5.99E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[273-333] 20.682 |
| SMART |
Homeobox_dom (IPR001356) - T[275-337] 4.6E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[276-334] 2.45878E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[276-332] 4.6E-21 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[308-331] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAX1_HUMAN | 62.295 % | 80.5 | 6.42E-17 |
| VAX2_HUMAN | 60.317 % | 80.5 | 4.06E-17 |
| NOTO_HUMAN | 38.4 % | 82 | 7.47E-18 |