- Transcript 'Cisavi.CG.ENS81.R347...' >
- Clone 'ma329e13' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S551.g02296.02.t
Possible name(s)
ACTB; ACTG1; ACTG2
Gene model
Location
S551 [25,933 / 28,440]
Amino acid sequence
Length: 368
>Phfumi.CG.MTP2014.S551.g02296.02.p
QSLVVDNGSGMCKAGYAGDDAPRAVFPSIVGRPRHQMVGMGQKDSYVGDEAQSKRGILTL
AYPIEHGIVTNWDNMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTD
YLMKILTERGYSFTTTAEREIVRDMKEKLCYIALDFEQEMQTASSSSSLEKSYELPDGQV
ITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGNTMFP
GISDRMQKEISSLAPPTMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKAEYDDSGP
SIVHRKCF
Nucleotide sequence
Length: 1,107
>Phfumi.CG.MTP2014.S551.g02296.02.t
CAATCCTTGGTTGTTGACAATGGTTCGGGAATGTGTAAAGCTGGTTATGCTGGAGATGAC
GCACCAAGAGCTGTGTTTCCGTCAATTGTAGGACGCCCAAGACATCAGATGGTTGGAATG
GGTCAAAAGGATAGTTACGTCGGTGATGAAGCTCAGAGCAAGCGTGGAATTCTAACCCTC
GCCTATCCGATTGAGCACGGGATTGTGACCAACTGGGATAACATGGAAAAGATCTGGCAT
CACACTTTCTACAACGAACTTCGTGTTGCCCCCGAGGAACACCCCGTTCTGCTCACGGAA
GCCCCACTTAACCCCAAAGCAAACCGTGAAAAAATGACTCAAATCATGTTCGAGACATTC
AACACACCTGCAATGTATGTTGCTATTCAAGCTGTTCTTTCTCTTTACGCATCGGGAAGA
ACTACAGGCATTGTGTTGGACAGTGGTGATGGTGTCTCGCATACAGTTCCCATCTACGAG
GGATACGCCCTCCCGCACGCCATCATTCGGTTGGATTTGGCTGGTCGCGACTTGACTGAT
TATCTCATGAAGATCCTCACCGAGCGAGGGTACTCATTCACCACAACAGCTGAACGGGAA
ATCGTTAGAGACATGAAAGAAAAATTATGCTACATTGCACTGGACTTTGAACAGGAAATG
CAAACGGCTTCCAGCAGCAGCTCCCTCGAGAAGAGCTACGAACTTCCCGACGGACAGGTT
ATTACGATCGGAAACGAACGATTTCGATGTCCGGAAACTCTCTTCCAACCAGCTTTTATC
GGTATGGAGTCAGCAGGCATTCACGAAACTACGTACAACTCAATCATGAAGTGTGATGTT
GACATCAGAAAAGATTTGTACGCCAACACTGTGCTTAGTGGGGGAAACACTATGTTTCCA
GGTATATCTGATCGTATGCAAAAAGAAATCTCCAGCCTCGCTCCACCAACTATGAAGGTC
AAGATCATTGCTCCTCCTGAACGCAAATACTCCGTATGGATTGGAGGTTCAATCCTCGCA
TCTCTCTCCACCTTCCAGCAGATGTGGATTTCGAAAGCCGAGTACGACGATTCCGGACCG
AGCATTGTTCATCGCAAATGTTTCTAA
| SMART |
Actin (IPR004000) - T[1-368] 8.6E-232 |
| Pfam |
Actin (IPR004000) - T[1-368] 6.5E-149 |
| PANTHER |
Actin (IPR004000) - T[3-367] 2.6E-257 |
| PRINTS |
Actin (IPR004000) - T[21-30] 1.2E-56 - T[42-53] 1.2E-56 - T[54-76] 1.2E-56 - T[108-121] 1.2E-56 - T[133-152] 1.2E-56 - T[229-245] 1.2E-56 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[46-56] . - T[349-357] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[97-109] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 92.412 % | 728 | 0 |
| ACTB_HUMAN | 92.683 % | 728 | 0 |
| ACTA_HUMAN | 90.786 % | 717 | 0 |