Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S5624.g07031.01.t

Possible name(s)

RPL5

Gene model

Phfumi.CG.MTP2014.S5624.g07031

Location

S5624 [1,481 / 4,602]

Sequences

Amino acid sequence

Length: 278

>Phfumi.CG.MTP2014.S5624.g07031.01.p
QGFVKVVKNKAYFKRYQVKYKRRREGKTDYFARKRLVVQDRNKYNSPKYRMIVRFTNKDI
VTQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYE
GQTEVDGDDFNVEDVDGQPGAFRAYLDIGLARTTTGARIFGAMKGAVDGGLDIPHSNKRF
PGYDSESKEFSAEVHRNHIFGQHVAEYMRNLEGEDEDTYKRQFSQFIKNGVTADNVEEMY
TKCHAAIREDPTPKQKVDKQVSKKRWNREKMSRAQRMD

Nucleotide sequence

Length: 834

>Phfumi.CG.MTP2014.S5624.g07031.01.t
CAGGGATTCGTAAAAGTTGTGAAAAACAAAGCCTACTTCAAGCGGTACCAAGTAAAGTAT
AAGAGACGCCGAGAAGGCAAAACTGATTACTTTGCTCGCAAACGTCTTGTGGTCCAAGAC
AGGAATAAATACAACAGTCCCAAGTATCGCATGATTGTTAGGTTTACCAACAAGGACATT
GTTACACAGATAGCGTATGCTCGTATCGAAGGAGATGTGGTAATATGTGCTGCATATGCC
CATGAACTTCCACGATATGGAGTCAAGGTCGGGTTGACCAACTACGCCGCTGCATACTGC
ACTGGTCTGCTTCTTGCTCGCAGGCTTCTAAACAAGTTTGGATTGGACAAGATTTACGAG
GGACAAACTGAAGTTGATGGAGATGATTTCAATGTGGAGGATGTTGACGGACAGCCCGGT
GCATTCCGAGCTTACCTTGACATTGGTTTGGCTCGGACAACCACTGGAGCGAGGATTTTT
GGTGCCATGAAAGGAGCTGTTGATGGTGGATTGGACATCCCTCACTCCAACAAGAGATTC
CCTGGCTATGACTCAGAGTCAAAGGAATTCAGCGCTGAGGTGCATAGAAATCATATTTTT
GGGCAACATGTTGCGGAATATATGAGGAATCTTGAAGGAGAGGATGAAGATACTTACAAG
AGACAGTTCTCGCAATTCATCAAGAACGGAGTAACTGCTGATAATGTGGAGGAGATGTAC
ACAAAATGTCACGCTGCGATCCGAGAGGACCCAACTCCCAAACAGAAAGTGGATAAGCAA
GTCAGCAAGAAAAGGTGGAACCGCGAAAAGATGTCCAGAGCCCAGAGAATGGAC

InterProScan

PANTHER	Rbsml_L5_euk/L18_arc (IPR005485) - T[2-277] 4.9E-149
Pfam	Rbsml_L5_euk/L18_arc (IPR005485) - T[14-176] 9.3E-90
Hamap	Rbsml_L5_euk/L18_arc (IPR005485) - T[14-247] 21.419
PRINTS	Rbsml_L5_euk/L18_arc (IPR005485) - T[20-39] 1.6E-73 - T[43-62] 1.6E-73 - T[84-104] 1.6E-73 - T[145-164] 1.6E-73 - T[165-184] 1.6E-73 - T[207-227] 1.6E-73
Pfam	Rbsml_L5e/L18P_C (IPR025607) - T[192-277] 7.4E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL5_HUMAN	77.978 %	432	1.8E-154