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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  2. Clone 'cien78008' > 
  3. Clone 'AHC0AAA197YN04' > 
  4. Transcript 'Harore.CG.MTP2014.S1...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S564.g02321.02.t

Possible name(s)

TFF1

Gene model

Phfumi.CG.MTP2014.S564.g02321

Location

S564 [7,493 / 13,016]

Sequences

Amino acid sequence

Length: 730

>Phfumi.CG.MTP2014.S564.g02321.02.p
MKVVFFLLPLLAVTFSAPATETNGFDVNNEPLLIFALVAAQRHGVDPTNVLDLIMPTLLK
DGMKFSKEKQLALLSAGGLAHDQAMSVLRDLLPILMHKGKSVEEQAMALLLASKQFCRKN
KDEDSTCPEEEETVLPLVAMQTERGCDFRHIETEGDVVIPTNETCLCDDQTDLMFWISLL
GQFSEKAKTETPDQFPLMLLLFLDDAKCSGTLKNSVGPCTCMQVNMGHEATLLQYLITSP
EVRNLLTDEQRKIVTEALGTPAHRASLTMQDYLYSVMAGFTSPQMLSLLQNQGQGKDSML
KQLILSSIGIDSSMVHIILNGGFNDNADKMSIIKYLTNMGALDASIIPFLLGVQNGKDFL
LASMVNSGQLDPLMTVMLGMAEGGLTTEELLNLMLFQSFQAKNPALFDSIGKPYVPALPR
GVYPGSHLYFAHFETLGVNTCSLHDLRNRYDCGYIGISAAECESVPYCCYNPVFLTDIEV
RNATEGQITSAATIPWCYYNIFFVYYNTYYMEVKAPGEFAAPLECFGLFKYGLKLDPNLY
HLYDPQNPNTGISRLMRPRYECGFPGISEFQCVAIRGCCWDGDAPYRIPQCFKRNGALSL
PFKFSKIPAAFMPKNGTCNLNKYEIPLLYDMRTPCHYRFEFYIAGYDILAVPNEMDCTTK
LGCCWERNEEVLRKYPNTPRCYERVGGYHHQVPSGLPSASALIRSGGSDEAGSQVVEYAI
GAGMPPVMKP

Nucleotide sequence

Length: 2,193

>Phfumi.CG.MTP2014.S564.g02321.02.t
ATGAAGGTTGTGTTCTTTCTTTTGCCATTGCTGGCTGTTACGTTCTCAGCACCAGCAACT
GAGACAAATGGCTTTGACGTTAACAACGAACCACTTTTGATATTTGCACTCGTCGCTGCA
CAAAGACATGGAGTTGACCCCACGAATGTTCTTGATCTCATCATGCCAACACTTTTGAAA
GACGGAATGAAATTCTCCAAAGAAAAGCAACTTGCTTTGTTAAGTGCTGGAGGCCTCGCT
CACGACCAAGCAATGTCTGTACTTCGGGATTTGCTTCCAATCCTCATGCACAAGGGAAAA
TCTGTTGAAGAACAAGCGATGGCTCTTCTCCTAGCTTCCAAACAGTTCTGCCGCAAAAAC
AAGGATGAAGATTCAACCTGTCCTGAGGAAGAGGAGACGGTGCTGCCCCTAGTGGCCATG
CAGACGGAGCGTGGTTGCGATTTCCGACACATTGAAACCGAAGGCGATGTAGTCATTCCA
ACCAACGAAACATGTCTTTGTGACGACCAAACCGACCTAATGTTTTGGATTTCCCTTTTG
GGACAGTTTTCTGAAAAAGCAAAGACTGAAACGCCTGATCAATTTCCACTCATGCTTTTG
TTATTTCTTGACGACGCTAAATGCAGTGGTACACTAAAGAACTCAGTTGGACCCTGCACA
TGTATGCAAGTCAACATGGGCCACGAAGCAACCCTTTTGCAATACCTCATTACCTCACCC
GAAGTTCGCAATCTACTTACTGACGAACAACGAAAGATAGTGACTGAAGCATTGGGAACA
CCAGCCCACCGAGCCTCGCTTACAATGCAAGATTACCTCTACTCTGTAATGGCCGGTTTC
ACATCCCCTCAAATGCTTTCACTGCTACAAAACCAGGGGCAAGGCAAAGATTCCATGTTA
AAGCAGCTGATCCTATCCAGTATCGGAATTGACTCGTCGATGGTGCATATCATTTTGAAC
GGTGGATTTAATGATAATGCCGATAAGATGTCGATTATCAAATACCTTACCAACATGGGG
GCTCTTGACGCATCAATTATTCCATTCTTGCTGGGTGTGCAAAACGGAAAAGACTTTCTT
CTGGCGAGCATGGTCAACTCTGGGCAACTGGATCCTTTGATGACCGTTATGCTGGGAATG
GCCGAAGGGGGCCTTACCACCGAGGAACTGTTAAACCTTATGCTCTTCCAAAGTTTTCAG
GCAAAGAATCCAGCCCTTTTCGACAGCATTGGCAAACCATATGTTCCTGCTCTTCCCAGA
GGAGTTTATCCGGGAAGTCACCTTTACTTTGCCCACTTCGAAACGCTCGGAGTCAACACT
TGCTCTCTGCACGACCTGCGTAACAGATACGATTGTGGTTACATTGGAATCAGCGCAGCG
GAATGCGAAAGTGTGCCATACTGCTGCTACAATCCCGTCTTTTTGACTGATATTGAAGTG
CGAAATGCCACTGAAGGTCAAATCACCTCAGCCGCTACCATTCCATGGTGTTACTACAAT
ATCTTTTTCGTCTACTACAACACATATTACATGGAAGTTAAGGCCCCTGGTGAATTCGCT
GCACCTCTCGAATGCTTCGGTCTTTTCAAGTACGGGCTCAAACTTGACCCCAATCTGTAC
CACTTGTACGATCCACAAAACCCCAACACCGGCATTTCAAGACTCATGAGACCTCGATAC
GAATGTGGTTTCCCTGGTATCTCTGAATTCCAATGCGTTGCCATTCGTGGTTGCTGTTGG
GATGGCGACGCGCCGTACAGAATTCCACAATGTTTCAAACGCAACGGAGCTCTTTCCCTT
CCCTTTAAATTTAGCAAAATTCCTGCTGCATTTATGCCCAAAAACGGAACTTGCAACCTT
AACAAATACGAAATTCCACTTTTGTACGATATGCGAACCCCATGTCACTACCGCTTCGAG
TTCTACATTGCCGGATACGACATTTTGGCCGTCCCTAACGAAATGGATTGCACCACAAAG
CTTGGATGTTGTTGGGAGCGAAACGAAGAGGTTTTGAGAAAATATCCGAACACTCCACGT
TGCTACGAGCGGGTCGGTGGTTATCATCATCAAGTTCCTTCAGGGTTGCCAAGTGCCAGT
GCCCTTATTCGAAGCGGAGGTTCTGATGAAGCAGGCAGCCAAGTCGTCGAATACGCCATA
GGCGCGGGAATGCCCCCGGTGATGAAACCGTAA

InterProScan

CDD
P_trefoil_dom (IPR000519) - T[439-500] 2.09865E-7 - T[558-595] 6.47551E-10
ProSiteProfiles
P_trefoil_dom (IPR000519) - T[439-501] 10.689 - T[550-595] 9.515
SMART
P_trefoil_dom (IPR000519) - T[439-504] 1.1E-10 - T[549-598] 8.5E-8
Pfam
P_trefoil_dom (IPR000519) - T[441-500] 8.4E-13 - T[559-593] 2.6E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value