Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S572.g02337.01.t

Possible name(s)

CASP3; CASP6; CASP7

Gene model

Phfumi.CG.MTP2014.S572.g02337

Location

S572 [16,948 / 19,176]

Sequences

Amino acid sequence

Length: 274

>Phfumi.CG.MTP2014.S572.g02337.01.p
MAESSVNVVDGPGAGEVLMRGIADGNKNNNNQEQENQVHVDARGLSGDFFTKRKPTPSCI
SHYNMDFQNRGYAVIVNNESFHWSTGMNKRVGRDIDAKNLHMVFKRLGFEVDMHKDIKCI
TLHELIAKYAKEDHSNSDCFVFAILSHGDDGCIYGTDGTIRIKQLVDKFRGDKCPSLAGK
PKIFMFQACRGMEYEIPVTPANDVVDAAEGPEENTLCIDSGPVPTLPCGSDFLFCYSVAQ
GFYSFRDTLFGSWYIQEFTDVMESLVLDVPGKKS

Nucleotide sequence

Length: 822

>Phfumi.CG.MTP2014.S572.g02337.01.t
ATGGCAGAAAGTAGTGTAAACGTGGTAGATGGTCCTGGTGCTGGTGAAGTTTTAATGAGA
GGCATTGCTGATGGAAACAAAAACAATAACAACCAGGAACAGGAAAACCAAGTTCATGTC
GATGCACGTGGATTGAGTGGAGATTTTTTTACAAAGCGGAAACCAACTCCATCGTGTATC
AGCCATTATAACATGGATTTCCAGAATCGTGGATATGCTGTCATAGTGAACAATGAATCC
TTTCATTGGTCAACAGGAATGAACAAGCGGGTTGGGAGAGATATTGATGCAAAGAACTTA
CATATGGTTTTTAAGAGACTTGGTTTTGAAGTGGATATGCACAAAGACATTAAGTGTATC
ACCCTGCATGAGTTAATTGCAAAGTATGCAAAAGAGGACCACTCGAATTCGGATTGCTTT
GTGTTTGCCATTTTGAGCCATGGTGATGATGGATGTATCTATGGAACCGATGGCACGATC
AGAATCAAACAACTTGTTGACAAATTTCGTGGCGATAAATGTCCTTCGTTAGCTGGCAAG
CCCAAGATATTCATGTTCCAGGCATGTAGAGGTATGGAGTACGAAATACCAGTTACACCA
GCCAATGATGTTGTGGATGCTGCAGAAGGGCCTGAAGAAAATACACTTTGTATTGACAGT
GGACCAGTACCAACTCTGCCATGTGGATCAGATTTTCTGTTCTGTTATTCCGTTGCCCAA
GGATTTTACTCTTTTCGTGATACACTTTTTGGATCGTGGTATATTCAAGAATTCACAGAT
GTAATGGAATCGCTGGTTTTGGATGTCCCAGGTAAAAAAAGC

InterProScan

PANTHER	Caspase_6 (IPR037554) - T[27-264] 5.9E-79
SUPERFAMILY	Caspase-like_dom_sf (IPR029030) - T[54-265] 2.69E-66
SMART	Pept_C14A (IPR015917) - T[62-274] 2.4E-54
CDD	Pept_C14A (IPR015917) - T[63-264] 7.92962E-75
PRINTS	Pept_C14A (IPR015917) - T[69-82] 2.7E-28 - T[90-108] 2.7E-28 - T[108-126] 2.7E-28 - T[140-148] 2.7E-28 - T[174-192] 2.7E-28 - T[244-255] 2.7E-28
ProSiteProfiles	Pept_C14_p20 (IPR001309) - T[69-193] 44.989
ProSitePatterns	Caspase_his_AS (IPR016129) - T[134-148] .
ProSitePatterns	Caspase_cys_AS (IPR033139) - T[180-191] .
ProSiteProfiles	Pept_C14_p10 (IPR002138) - T[222-263] 15.213

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CASP7_HUMAN	40.845 %	171	6.37E-52
CASP3_HUMAN	39.801 %	164	1.07E-49
CASP6_HUMAN	41.921 %	184	6.83E-57