- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5768.g07099.02.t
Possible name(s)
KATNB1; POC1B; WDR33
Gene model
Location
S5768 [7,101 / 10,485]
Amino acid sequence
Length: 679
>Phfumi.CG.MTP2014.S5768.g07099.02.p
HSYFQAHDSPVRAMSWSRNDAWLITGDNFGYIKYWQLNMNNVKMYQAHKDQACRSVCFGP
TDSKFVTASDDGTVRVWDFLRCHEEHILRGHGSDVKQVDWHPHKCLIASASKDLQTPVKL
WDPKAGQSLATIHAHKGTVMDIKFNRNGNWFLTASRDHLVKLYDIRNLKEEFQVFRGHKK
EAFSVAWHPIHEDMFASGGSEGSIIFWQVGEDKEVGGLDGAHDSLIWSLAWHPLGHILVS
GSNDHSTKFWTRNRPGDHMRDKYNLFPTVEDSNAPKPTNLAVQPDDTPHIPHIPGMGDAV
AAAADVAKREEEELKVGIPGLDWSFEERSEFQRKIMVQHENRKKIPYARPVPRTFAAAWE
SNKAGAPRREWSRSPSPPPPRRDRFEEPPPWHRGERMPPRFRHGPPGHDRHPRDHDNPRP
PIDDRRPPPEFRRGRMSPEPGPPPDFELMRPGPERRPSLDFPPDGPFAERPIDHDMVDDR
HFVDNPRGDIKFIPHNPREAEFEVPNNHMQSEHHIPHKNLPPPVEPGGPLHDSGPGSGNF
HREPGILENSPLDWGGNFNQDQYEGDGPNLDKFYGQERGNMFNQGMEANMGEYGYEHDMG
YNDMERRGPEGMRGDRDIPVRPRGSFGRPPGRMRGRGRPGSGRFPHPEIMANRGRNWPPM
RQQNPPFRIRRGGRRAMRD
Nucleotide sequence
Length: 2,040
>Phfumi.CG.MTP2014.S5768.g07099.02.t
CATTCATATTTCCAGGCTCATGACAGTCCAGTGCGTGCCATGTCTTGGTCCAGAAACGAT
GCATGGCTGATCACTGGTGACAACTTTGGATACATCAAATACTGGCAGTTAAACATGAAC
AATGTTAAAATGTACCAAGCACATAAAGATCAAGCATGTCGTTCAGTTTGCTTTGGCCCA
ACAGACAGCAAATTTGTTACAGCAAGTGATGATGGAACAGTGAGAGTTTGGGATTTTTTA
AGGTGCCATGAAGAACATATTCTAAGGGGTCATGGTTCTGATGTAAAACAGGTTGATTGG
CATCCCCATAAATGTCTGATCGCTTCAGCAAGCAAAGATTTGCAAACCCCAGTAAAACTG
TGGGACCCGAAAGCTGGTCAGAGTCTTGCCACCATACATGCCCACAAAGGTACTGTAATG
GACATCAAGTTTAATCGCAATGGAAACTGGTTTCTAACTGCCTCTCGTGACCATCTTGTT
AAGTTGTATGATATTAGAAACTTGAAAGAAGAATTCCAGGTATTTCGGGGCCACAAAAAA
GAAGCTTTTTCAGTTGCATGGCATCCAATACATGAAGACATGTTTGCAAGTGGTGGTTCT
GAGGGAAGTATCATATTTTGGCAAGTTGGGGAAGATAAAGAAGTTGGTGGACTGGATGGT
GCTCATGACAGTCTGATATGGAGTCTCGCTTGGCATCCACTTGGTCACATTCTTGTATCT
GGTTCTAATGATCACAGCACAAAATTTTGGACTAGAAACAGACCTGGTGATCATATGCGA
GACAAATATAACCTGTTTCCAACTGTGGAAGACTCTAATGCCCCAAAACCAACAAATTTA
GCAGTGCAACCAGATGATACACCTCACATACCTCATATTCCAGGTATGGGTGATGCTGTA
GCTGCAGCAGCAGATGTTGCCAAAAGAGAAGAGGAAGAGTTAAAAGTTGGAATACCTGGA
CTTGATTGGTCCTTTGAAGAAAGAAGTGAATTCCAAAGAAAGATAATGGTTCAGCATGAG
AACAGGAAAAAAATTCCATATGCAAGACCAGTACCAAGGACATTTGCAGCTGCTTGGGAA
TCAAACAAAGCTGGTGCTCCAAGAAGGGAATGGTCAAGATCTCCCTCACCACCCCCGCCA
AGAAGAGACAGATTTGAAGAGCCCCCACCTTGGCACAGAGGTGAAAGAATGCCTCCAAGG
TTTCGACATGGCCCACCAGGCCATGACAGACATCCACGGGACCATGATAATCCACGCCCT
CCAATAGATGATCGACGACCACCCCCAGAATTTCGCCGAGGCAGAATGTCACCAGAGCCA
GGTCCACCTCCTGACTTTGAACTAATGAGGCCAGGTCCTGAAAGAAGGCCCTCTCTGGAC
TTTCCACCAGATGGTCCCTTTGCTGAGCGCCCAATCGACCATGATATGGTTGATGATCGA
CATTTTGTTGACAACCCACGTGGAGATATAAAATTTATTCCCCACAATCCAAGAGAAGCT
GAATTTGAAGTCCCCAACAATCATATGCAGAGTGAACACCATATACCACACAAAAACTTA
CCTCCACCAGTTGAACCTGGTGGACCTTTGCATGACTCTGGCCCTGGCTCTGGCAATTTT
CACCGCGAGCCAGGAATACTGGAAAATTCTCCATTGGATTGGGGAGGGAATTTTAATCAA
GACCAGTATGAAGGGGATGGGCCCAATTTGGATAAATTTTATGGACAAGAGCGAGGCAAT
ATGTTTAATCAGGGTATGGAAGCAAACATGGGGGAATATGGGTATGAACATGATATGGGT
TACAATGACATGGAACGACGCGGTCCAGAGGGCATGCGTGGGGATCGTGACATTCCAGTT
AGACCAAGGGGGAGCTTTGGCCGCCCACCTGGTCGCATGAGGGGAAGAGGGAGGCCTGGT
TCTGGACGATTTCCCCACCCTGAAATAATGGCGAACAGGGGTCGAAACTGGCCACCAATG
AGGCAACAAAACCCACCTTTTAGAATCAGGCGTGGTGGGCGAAGGGCAATGCGCGATTGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-169] 3.9E-41 - T[170-269] 2.0E-19 |
| SMART |
WD40_repeat (IPR001680) - T[1-36] 27.0 - T[38-78] 5.6E-8 - T[81-122] 6.9E-6 - T[125-164] 3.3E-8 - T[168-208] 1.7E-5 - T[211-251] 3.7E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[4-27] 0.076 - T[40-78] 1.2E-5 - T[85-113] 0.007 - T[126-164] 2.3E-5 - T[221-250] 0.0022 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[4-45] 10.308 - T[55-78] 10.909 - T[132-173] 11.912 - T[175-217] 10.341 - T[219-250] 11.411 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[4-260] 43.714 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[4-254] 6.02E-61 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KTNB1_HUMAN | 29.339 % | 103 | 7.48E-23 |
| POC1B_HUMAN | 29.245 % | 92.4 | 1.22E-19 |
| WDR33_HUMAN | 61.008 % | 480 | 2.4E-154 |