- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S577.g02349.01.t
Possible name(s)
TGFB1; TGFB2; TGFB3
Gene model
Location
S577 [13,536 / 22,454]
Amino acid sequence
Length: 472
>Phfumi.CG.MTP2014.S577.g02349.01.p
CESRAGFNSKASRFAKTALTFRLEGFIKVKLSSNMSPTLCQRDRRSWSTLTCCCCLLIVV
VLVLHASSTASGCGVNFDKMRKRRIEAIRGQILSKLGLTHLPTDEQPPPDSMTVEIEAMY
NRTRDFVLEQARQKREECLEPEDNYYAQDITTVYMKNPTQAASSIPGSTAPRYKYQKSQQ
GVSEFFDFDLTQTELDPDTIVSASLRVYQVPSTADGTREQVELYHLSSPQKDGQSPTKSF
LHMQLMDTANEGWITFDVTSSVRQWIQFPNLNQGLELTVPCSNDEPPSTMKRAANRGITR
KLDVMFAGSTKISKSRGDSDAGAAVEQEFGKEFNPHLIIMVRTPTPEAPQGSSRRRKRAL
DADFCFRRKASDTNCCLRELYIDFRKDLGWNWVHAPTGYKANFCGGACPYMWSTDTQYAT
ILTLYKSMNPQASSAPCCTAKDLDPLTIMYYKNGSYKFINMSDMVLLSCKCS
Nucleotide sequence
Length: 1,421
>Phfumi.CG.MTP2014.S577.g02349.01.t
ACTGTGAATCTCGTGCAGGATTTAATAGTAAAGCGAGTCGTTTTGCGAAAACTGCTTTAA
CGTTTAGACTTGAAGGCTTTATCAAGGTCAAACTGAGCTCAAACATGAGTCCAACGCTTT
GTCAAAGAGACAGGCGTTCGTGGTCCACGCTGACTTGTTGCTGCTGTTTACTGATCGTCG
TGGTTCTGGTGCTGCATGCTTCGTCGACCGCCTCTGGCTGCGGTGTGAACTTCGATAAAA
TGCGCAAACGCCGCATCGAGGCGATCCGTGGGCAGATCCTAAGTAAACTTGGGCTCACAC
ACTTACCCACAGACGAGCAGCCGCCCCCTGATAGCATGACTGTGGAAATTGAGGCAATGT
ACAATCGCACCAGAGACTTTGTTCTGGAACAGGCACGCCAAAAACGCGAGGAATGCCTGG
AACCCGAAGACAACTACTACGCCCAGGACATCACAACCGTGTACATGAAAAACCCTACTC
AGGCGGCATCTAGCATTCCCGGCTCCACTGCACCTCGCTACAAATACCAGAAAAGTCAGC
AGGGTGTCTCGGAGTTTTTCGACTTCGATCTCACGCAAACGGAATTGGATCCTGATACAA
TTGTAAGCGCATCACTTCGAGTCTACCAAGTTCCAAGCACCGCTGACGGCACGAGGGAAC
AGGTTGAGCTCTATCACCTTTCGTCGCCGCAAAAAGATGGCCAATCTCCAACCAAAAGCT
TTCTTCACATGCAACTGATGGATACAGCCAATGAGGGTTGGATTACCTTTGACGTCACAT
CTTCCGTCCGTCAATGGATCCAGTTCCCCAACTTGAATCAGGGCCTCGAGTTGACTGTTC
CTTGTTCGAACGACGAACCACCTTCTACCATGAAGCGGGCAGCTAACCGTGGGATTACGC
GCAAATTGGATGTGATGTTTGCAGGATCAACAAAAATTTCCAAATCCCGCGGGGACAGCG
ATGCCGGCGCCGCCGTCGAACAAGAGTTTGGAAAAGAGTTTAATCCCCATCTGATCATTA
TGGTCCGGACTCCCACACCAGAAGCGCCACAAGGTTCAAGCAGGCGGCGAAAAAGAGCTC
TGGATGCAGATTTCTGCTTCCGCCGCAAGGCCTCCGACACCAACTGCTGTCTGCGGGAAT
TGTACATCGATTTTCGGAAGGACCTCGGATGGAACTGGGTGCATGCCCCGACTGGATACA
AAGCAAATTTCTGTGGTGGTGCATGTCCGTACATGTGGAGCACCGACACTCAATACGCCA
CAATACTAACCCTCTACAAGTCGATGAACCCTCAGGCCTCGTCGGCACCTTGCTGTACAG
CAAAAGATTTGGATCCGTTGACGATCATGTACTACAAGAACGGCTCGTACAAGTTTATTA
ACATGTCTGATATGGTCTTGCTCTCCTGCAAATGTAGCTGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[48-459] 3.7E-117 |
| PIRSF |
TGF-beta (IPR016319) - T[49-472] 2.5E-99 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[78-288] 1.1E-26 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[355-472] 34.424 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[359-472] 6.4E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[368-471] 1.07E-30 |
| Pfam |
TGF-b_C (IPR001839) - T[374-471] 6.9E-23 |
| SMART |
TGF-b_C (IPR001839) - T[375-472] 1.3E-32 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[393-408] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TGFB3_HUMAN | 36.047 % | 259 | 5.5E-82 |
| TGFB2_HUMAN | 36.597 % | 270 | 1.98E-86 |
| TGFB1_HUMAN | 35.589 % | 230 | 3.66E-71 |