- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Clone 'ma153i01' >
- Transcript 'KH2012:KH.C14.261.v2...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5784.g07105.01.t
Possible name(s)
LRIG3; RXFP2; TRIL
Gene model
Location
S5784 [2,857 / 5,531]
Amino acid sequence
Length: 383
>Phfumi.CG.MTP2014.S5784.g07105.01.p
IADECSRVPYHFGNETTVTVTCHLNGPITINDNFTYATLRGIQNPAKHKDDALSNEEDET
NLSEILYRLIMTESGVSSIEDWGFGYEPTLKELNLRQNSLKSIGRYTFVGISNLEILDLG
DNSIATVQPLSFVPLRNVKTLEMDNNKLTWINSLTFQGLNEINFINLDNNNISRWSSAAF
ASLWQLEYLHLANNRISSLDGSKLAGMNALKYLSLKGNVIDSIAAGAFNGKPKLETLDLS
GNKLSKITTQTFSGLTSLKTLNLRNNVIRTIDDLSFAHIPQMRELDLSHNGLVTLSRGMF
IGMENINSFNVADNWMQATALSPDPEFDEPRNKLIEAIGIICIKPGVYYADFSGNLLKPM
LQNVTESALGFDFSDRSQHVCVF
Nucleotide sequence
Length: 1,152
>Phfumi.CG.MTP2014.S5784.g07105.01.t
ATTGCAGACGAGTGCAGCAGGGTCCCATATCACTTCGGCAACGAAACCACTGTGACGGTC
ACGTGTCATCTGAACGGACCAATCACCATCAATGACAATTTTACTTATGCGACTCTACGT
GGCATCCAAAACCCCGCCAAGCACAAGGATGATGCGCTTAGTAATGAAGAAGACGAAACA
AATCTCAGTGAGATCTTATATCGCCTTATCATGACTGAGTCGGGTGTCAGCAGTATCGAA
GATTGGGGATTTGGATACGAACCCACTCTGAAGGAGCTCAATCTTCGCCAAAACAGCCTC
AAAAGCATTGGACGCTACACCTTTGTTGGTATTTCAAACCTGGAGATTCTCGATTTGGGC
GATAACTCTATCGCAACTGTTCAACCACTTTCGTTCGTGCCTCTACGCAACGTCAAGACT
TTGGAAATGGACAACAACAAGCTTACATGGATCAACTCCTTAACGTTTCAGGGTCTTAAT
GAGATCAACTTCATCAATCTCGACAACAACAACATCAGCCGGTGGTCCAGCGCCGCGTTC
GCGTCTCTATGGCAACTCGAGTATCTTCACCTCGCCAACAACCGTATTTCGTCGCTCGAT
GGCAGCAAACTCGCAGGAATGAACGCTCTGAAATATTTGTCTTTGAAAGGCAACGTTATT
GACAGCATCGCGGCTGGTGCATTCAATGGCAAACCGAAACTGGAGACTTTGGACTTATCT
GGCAACAAATTAAGTAAGATAACGACACAAACATTCAGTGGATTGACGTCACTGAAGACA
CTCAACCTGCGCAACAACGTCATCAGGACGATCGACGACCTCTCTTTCGCACATATACCT
CAGATGCGCGAGTTGGATCTGTCGCACAATGGCCTTGTAACATTGAGCCGAGGCATGTTT
ATCGGCATGGAGAACATCAACAGTTTCAATGTTGCGGACAACTGGATGCAGGCAACTGCT
CTTTCGCCTGATCCAGAGTTCGACGAACCGAGAAACAAATTGATCGAAGCCATTGGAATC
ATATGCATCAAACCAGGAGTTTATTACGCTGACTTTTCGGGAAACTTACTCAAACCTATG
CTGCAGAACGTGACAGAATCTGCACTTGGATTTGACTTTTCTGATCGCAGTCAGCATGTC
TGCGTTTTCTGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[54-206] 6.5E-30 - T[207-249] 5.8E-10 - T[250-345] 1.2E-15 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[88-110] 48.0 - T[111-134] 9.5 - T[135-158] 4.9 - T[159-182] 39.0 - T[183-206] 31.0 - T[207-230] 5.5 - T[232-254] 0.81 - T[255-278] 0.017 - T[279-302] 0.74 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[88-148] 6.0E-14 - T[232-292] 8.6E-18 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[89-110] 6.973 - T[113-134] 7.997 - T[137-158] 6.087 - T[161-182] 5.44 - T[185-206] 7.666 - T[209-230] 5.995 - T[233-254] 8.174 - T[257-278] 8.536 - T[281-302] 5.687 |
| Pfam |
Leu-rich_rpt_4 (IPR025875) - T[185-223] 1.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RXFP2_HUMAN | 30.126 % | 109 | 7.18E-26 |
| TRIL_HUMAN | 26.99 % | 110 | 4.18E-26 |
| LRIG3_HUMAN | 31.496 % | 109 | 8.88E-26 |