- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5784.g07105.02.t
Possible name(s)
LRIG3; RXFP2; TRIL
Gene model
Location
S5784 [2,857 / 5,728]
Amino acid sequence
Length: 355
>Phfumi.CG.MTP2014.S5784.g07105.02.p
IMSKLAAILVLSVCVTLAMSQENPDECSRVPYHFGNETTVTVTCHLNGPITINDNFTYAT
LRGIQNPAKHKDDALSNEEDETNLSEILYRLIMTESGVSSIEDWGFGYEPTLKELNLRQN
SLKSIGRYTFVGISNLEILDLGDNSIATVQPLSFVPLRNVKTLEMDNNKLTWINSLTFQG
LNEINFINLDNNNISRWSSAAFASLWQLEYLHLANNRISSLDGSKLAGMNALKYLSLKGN
VIDSIAAGAFNGKPKLETLDLSGLVTLSRGMFIGMENINSFNVADNWMQATALSPDPEFD
EPRNKLIEAIGIICIKPGVYYADFSGNLLKPMLQNVTESALGFDFSDRSQHVCVF
Nucleotide sequence
Length: 1,068
>Phfumi.CG.MTP2014.S5784.g07105.02.t
ATCATGTCAAAACTTGCAGCCATCCTAGTCTTGTCAGTTTGCGTCACTTTGGCGATGTCC
CAGGAAAATCCAGACGAGTGCAGCAGGGTCCCATATCACTTCGGCAACGAAACCACTGTG
ACGGTCACGTGTCATCTGAACGGACCAATCACCATCAATGACAATTTTACTTATGCGACT
CTACGTGGCATCCAAAACCCCGCCAAGCACAAGGATGATGCGCTTAGTAATGAAGAAGAC
GAAACAAATCTCAGTGAGATCTTATATCGCCTTATCATGACTGAGTCGGGTGTCAGCAGT
ATCGAAGATTGGGGATTTGGATACGAACCCACTCTGAAGGAGCTCAATCTTCGCCAAAAC
AGCCTCAAAAGCATTGGACGCTACACCTTTGTTGGTATTTCAAACCTGGAGATTCTCGAT
TTGGGCGATAACTCTATCGCAACTGTTCAACCACTTTCGTTCGTGCCTCTACGCAACGTC
AAGACTTTGGAAATGGACAACAACAAGCTTACATGGATCAACTCCTTAACGTTTCAGGGT
CTTAATGAGATCAACTTCATCAATCTCGACAACAACAACATCAGCCGGTGGTCCAGCGCC
GCGTTCGCGTCTCTATGGCAACTCGAGTATCTTCACCTCGCCAACAACCGTATTTCGTCG
CTCGATGGCAGCAAACTCGCAGGAATGAACGCTCTGAAATATTTGTCTTTGAAAGGCAAC
GTTATTGACAGCATCGCGGCTGGTGCATTCAATGGCAAACCGAAACTGGAGACTTTGGAC
TTATCTGGCCTTGTAACATTGAGCCGAGGCATGTTTATCGGCATGGAGAACATCAACAGT
TTCAATGTTGCGGACAACTGGATGCAGGCAACTGCTCTTTCGCCTGATCCAGAGTTCGAC
GAACCGAGAAACAAATTGATCGAAGCCATTGGAATCATATGCATCAAACCAGGAGTTTAT
TACGCTGACTTTTCGGGAAACTTACTCAAACCTATGCTGCAGAACGTGACAGAATCTGCA
CTTGGATTTGACTTTTCTGATCGCAGTCAGCATGTCTGCGTTTTCTGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[26-317] 1.9E-41 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[110-132] 48.0 - T[133-156] 9.5 - T[157-180] 4.9 - T[181-204] 39.0 - T[205-228] 31.0 - T[229-252] 5.5 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[110-170] 5.3E-14 - T[207-263] 2.3E-13 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[111-132] 6.973 - T[135-156] 7.997 - T[159-180] 6.087 - T[183-204] 5.44 - T[207-228] 7.666 - T[231-252] 5.995 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CPN2_HUMAN | 30.348 % | 89.4 | 1.67E-19 |
| LRFN5_HUMAN | 31.481 % | 93.2 | 9.78E-21 |
| RXFP2_HUMAN | 30.303 % | 87.4 | 8.19E-19 |