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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S83....' > 
  2. Transcript 'KH2012:KH.S1404.3.v1...' > 
  3. Transcript 'KH2012:KH.S1363.2.v1...' > 
  4. Transcript 'KH2012:KH.C11.151.v3...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S5.g00126.01.t

Possible name(s)

CARMIL1; CARMIL2; CARMIL3

Gene model

Phfumi.CG.MTP2014.S5.g00126

Location

S5 [261,887 / 277,884]

Sequences

Amino acid sequence

Length: 883

>Phfumi.CG.MTP2014.S5.g00126.01.p
SFASASNVPYDIAEGIRDVIGRKNVVTLKKMVKLERPQGDKVDAKVLVLTPYRCQILGVK
APFKMEADFHFLEIKSMDSPSPDRLVMSTHSSKIFFMQMIGTDDADHIIGRVALSLRTIF
PSVPLSRILKASLEPLHRQKVIQQMLNQADQSEPGPCGNFSEMYRCVCDFLSCPVREEVE
WDVDTIYLSQNCRELSLKDFDLPDARDIIPIVSVLNYNKWFEGLVVRNTKLHGEVLDFVL
KAARNSQNMKTLVLEGVGLKGEFAQKLATNMAENKESRIQSLDLSNNPLEDKGLIHLSGT
LPVIKHASLTDLNVARTGLTAKGVNGLCQALRSSANIMGSLTRLNLSGNCLKVDDSEGLY
NFLATENHIEELDLSATDSSVEMYISALSRGCLMHLQRADLSKNHFLGKSSVGQRYPHFL
EEEYSKIRKQKDTALPSSFQEFFQNTLALKSIDFSGIKFPNEALKCIMDGLLSNLTKGLE
VSLNLSSCEIKQSGCQVIQSGIGTVRNLVSLDLSDNSMDNELPNFFGWLQQNKSLRELKI
GRNFSGIKQKNMRPVMDSIVELVQEENSVLECLSLADSKLREYTHVLLGCLGSNTSLTDL
DISGNQMGDSGARVLAKSIQINSKLRVLKFDRNNLTAAGFHELAVAMAKNYTLRYMPYPV
NDCMGSMKQHPERTQSALAQIQDLLLRNTNTNRASNDQQFRLQKVVTSTAQQVLDKVAEK
VDDVINALEIIDAESESVSCVIAGKKLVRDAKNSKELLSDIYGLGMEKSAGPSSQLQCKI
SEMATNMDKMVQEHIKSTVEAMTKNAESQCPQIYEEIKSDLSESVADRQVLPTYCVRDHV
IQSSGTEIVNQVSELNLSIATLISDKVTDSLLAALSQCNLQLV

Nucleotide sequence

Length: 2,649

>Phfumi.CG.MTP2014.S5.g00126.01.t
TCGTTTGCTTCTGCAAGCAATGTCCCATATGACATCGCAGAGGGTATCCGCGATGTCATT
GGCCGGAAAAACGTGGTCACTTTAAAAAAGATGGTCAAGTTGGAGCGACCTCAAGGGGAC
AAAGTTGATGCCAAAGTTTTAGTTTTGACGCCGTATAGGTGCCAAATTCTCGGTGTCAAA
GCACCATTTAAAATGGAAGCAGACTTTCACTTCCTTGAAATCAAGTCAATGGACAGTCCA
TCCCCAGATCGGCTTGTGATGTCGACTCATAGTTCAAAGATATTTTTCATGCAAATGATT
GGAACTGATGATGCAGACCACATCATTGGAAGAGTGGCTTTGTCACTTCGCACCATCTTT
CCAAGTGTTCCTTTGTCACGGATCCTAAAGGCTTCACTGGAACCTCTACATCGTCAGAAG
GTTATTCAGCAAATGTTGAACCAGGCAGACCAGTCAGAACCTGGCCCATGTGGCAATTTC
TCTGAGATGTACCGCTGCGTTTGTGACTTCCTTTCTTGCCCTGTGAGAGAGGAAGTGGAG
TGGGATGTAGACACCATCTACCTGTCACAAAACTGCAGAGAGCTCAGTTTAAAGGATTTT
GACTTGCCAGATGCAAGAGATATCATTCCCATTGTGTCTGTGCTTAATTACAACAAATGG
TTTGAAGGTCTTGTTGTAAGAAATACTAAACTGCATGGGGAAGTCCTTGACTTTGTCTTA
AAAGCTGCCAGGAATTCACAAAATATGAAGACCTTGGTGTTGGAGGGTGTTGGACTAAAA
GGTGAATTTGCTCAGAAGTTGGCAACCAACATGGCCGAAAACAAGGAGAGCCGAATTCAG
TCATTGGATCTGTCCAACAACCCCTTGGAGGACAAAGGACTTATCCATCTGAGTGGAACG
CTGCCTGTGATAAAACATGCCAGTCTAACAGATCTCAATGTTGCTCGCACAGGCCTCACT
GCCAAAGGTGTAAATGGTTTGTGTCAAGCTCTCAGGTCAAGTGCAAACATAATGGGCAGT
TTAACTCGCCTGAATTTGTCTGGAAACTGCCTGAAAGTGGATGATTCCGAGGGACTTTAC
AACTTTTTGGCGACTGAAAATCACATTGAGGAGCTTGATCTCTCAGCCACTGACAGCTCT
GTGGAAATGTACATCAGTGCCCTTTCCCGAGGTTGTCTGATGCACTTGCAACGTGCCGAC
CTCTCAAAGAACCACTTCTTGGGAAAGTCATCTGTTGGACAGCGTTATCCCCATTTCCTT
GAGGAGGAATATTCTAAAATAAGGAAACAGAAAGATACGGCTCTGCCCTCATCTTTTCAA
GAGTTCTTTCAAAATACTCTTGCTCTGAAGTCCATTGATTTCTCTGGCATCAAATTTCCG
AATGAAGCACTGAAGTGCATCATGGATGGCTTGCTCAGCAACTTGACGAAAGGTCTGGAA
GTTTCACTCAACCTGTCAAGCTGTGAGATCAAGCAGTCCGGTTGCCAGGTCATCCAATCT
GGAATTGGGACAGTCCGTAACCTTGTCAGTCTGGATCTCTCCGACAACTCGATGGACAAT
GAACTCCCAAACTTCTTCGGTTGGTTGCAGCAAAACAAATCGCTTCGCGAATTGAAAATC
GGCCGAAACTTCTCAGGGATCAAGCAAAAAAATATGAGGCCTGTAATGGACAGCATCGTC
GAGCTGGTCCAAGAGGAAAACTCGGTCTTGGAATGCCTGTCTCTGGCTGATTCGAAGTTG
AGGGAGTACACCCATGTACTGCTGGGCTGTCTCGGCAGTAACACCTCGCTTACAGATCTC
GACATAAGTGGGAATCAAATGGGGGACAGTGGTGCCCGAGTTCTCGCCAAATCCATCCAG
ATCAACTCGAAACTGCGGGTTCTGAAGTTTGACAGGAACAATCTCACAGCTGCTGGCTTT
CATGAACTTGCTGTTGCCATGGCGAAAAACTACACGCTGCGGTACATGCCGTACCCAGTG
AACGACTGTATGGGATCCATGAAGCAGCACCCGGAAAGGACACAATCGGCTTTGGCCCAA
ATTCAAGACTTGCTGCTGCGAAACACCAACACCAACAGAGCGAGCAACGACCAGCAGTTC
AGACTGCAGAAGGTCGTCACCTCAACTGCACAACAAGTGTTGGATAAAGTGGCAGAAAAA
GTTGATGACGTGATCAACGCCCTGGAGATTATCGACGCCGAATCGGAAAGCGTCAGTTGC
GTCATCGCTGGCAAGAAGTTGGTCAGGGATGCGAAAAACTCCAAAGAGCTTTTGTCAGAT
ATATACGGTCTTGGCATGGAAAAATCCGCTGGACCCAGCAGCCAGTTACAATGCAAAATA
TCTGAGATGGCGACCAATATGGACAAAATGGTACAAGAGCACATCAAGAGTACCGTTGAA
GCGATGACCAAGAACGCTGAATCGCAATGCCCTCAAATATACGAGGAAATCAAGTCTGAC
TTGAGCGAATCAGTAGCGGACAGACAAGTCCTACCTACCTATTGTGTTAGAGATCACGTG
ATACAGTCGTCTGGAACTGAAATCGTCAACCAAGTTAGCGAGTTGAATCTCTCGATCGCC
ACTCTGATATCGGATAAAGTAACGGACAGTCTACTGGCCGCCCTTTCCCAATGCAACCTG
CAACTGGTA

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[2-116] 6.6E-29
PANTHER
CARMIL1 (IPR029764) - T[5-882] 1.0E-250
Gene3D
LRR_dom_sf (IPR032675) - T[160-688] 2.0E-135
Pfam
Leu-rich_rpt (IPR001611) - T[279-298] 0.051 - T[593-616] 4.4E-5
Pfam
CARMIL_C (IPR031943) - T[806-882] 2.2E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CARL1_HUMAN 41.545 % 666 0
CARL3_HUMAN 33.486 % 479 6.53E-151
CARL2_HUMAN 30.187 % 397 3.25E-120