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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.199.v2....' > 
  2. Transcript 'Haaura.CG.MTP2014.S2...' > 
  3. Transcript 'Cisavi.CG.ENS81.R22....' > 
  4. Transcript 'Phfumi.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S5.g00126.02.t

Possible name(s)

CARMIL1; CARMIL2; CARMIL3

Gene model

Phfumi.CG.MTP2014.S5.g00126

Location

S5 [263,225 / 276,143]

Sequences

Amino acid sequence

Length: 640

>Phfumi.CG.MTP2014.S5.g00126.02.p
MEADFHFLEIKSMDSPSPDRLVMSTHSSKIFFMQMIGTDDADHIIGRVALSLRTIFPSVP
LSRILKASLEPLHRQKVIQQMLNQADQSEPGPCGNFSEMYRCVCDFLSCPVREEVEWDVD
TIYLSQNCRELSLKDFDLPDASEFAQKLATNMAENKESRIQSLDLSNNPLEDKGLIHLSG
TLPVIKHASLTDLNVARTGLTAKGVNGLCQALRSSANIMGSLTRLNLSGNCLKVDDSEGL
YNFLATENHIEELDLSATDSSVEMFFQNTLALKSIDFSGIKFPNEALKCIMDGLLSNLTK
GLEVSLNLSSCEIKQSGCQVIQSGIGTVRNLVSLDLSDNSMDNELPNFFGWLQQNKSLRE
LKIGRNFSGIKQKNMRPVMDSIVELVQEENSVLECLSLADSKLREYTHVLLGCLGSNTSL
TDLDISGNQMGDSGARVLAKSIQINSKLRVLKFDRNNLTAAGFHELAVAMAKNYTLRYMP
YPVNDCMGSMKQHPERTQSALAQIQDLLLRNTNTNRASNDQQFRLQKVVTSTAQQVLDKV
AEKVDDVINALEIIDAESESVSCVIAGKKLVRDAKNSKELLSDIYGLGMEKSAGPSSQLQ
CKISEMATNMDKMVQEHIKSTVEAMTKNAESQCPQIYEVR

Nucleotide sequence

Length: 1,920

>Phfumi.CG.MTP2014.S5.g00126.02.t
ATGGAAGCAGACTTTCACTTCCTTGAAATCAAGTCAATGGACAGTCCATCCCCAGATCGG
CTTGTGATGTCGACTCATAGTTCAAAGATATTTTTCATGCAAATGATTGGAACTGATGAT
GCAGACCACATCATTGGAAGAGTGGCTTTGTCACTTCGCACCATCTTTCCAAGTGTTCCT
TTGTCACGGATCCTAAAGGCTTCACTGGAACCTCTACATCGTCAGAAGGTTATTCAGCAA
ATGTTGAACCAGGCAGACCAGTCAGAACCTGGCCCATGTGGCAATTTCTCTGAGATGTAC
CGCTGCGTTTGTGACTTCCTTTCTTGCCCTGTGAGAGAGGAAGTGGAGTGGGATGTAGAC
ACCATCTACCTGTCACAAAACTGCAGAGAGCTCAGTTTAAAGGATTTTGACTTGCCAGAT
GCAAGTGAATTTGCTCAGAAGTTGGCAACCAACATGGCCGAAAACAAGGAGAGCCGAATT
CAGTCATTGGATCTGTCCAACAACCCCTTGGAGGACAAAGGACTTATCCATCTGAGTGGA
ACGCTGCCTGTGATAAAACATGCCAGTCTAACAGATCTCAATGTTGCTCGCACAGGCCTC
ACTGCCAAAGGTGTAAATGGTTTGTGTCAAGCTCTCAGGTCAAGTGCAAACATAATGGGC
AGTTTAACTCGCCTGAATTTGTCTGGAAACTGCCTGAAAGTGGATGATTCCGAGGGACTT
TACAACTTTTTGGCGACTGAAAATCACATTGAGGAGCTTGATCTCTCAGCCACTGACAGC
TCTGTGGAAATGTTCTTTCAAAATACTCTTGCTCTGAAGTCCATTGATTTCTCTGGCATC
AAATTTCCGAATGAAGCACTGAAGTGCATCATGGATGGCTTGCTCAGCAACTTGACGAAA
GGTCTGGAAGTTTCACTCAACCTGTCAAGCTGTGAGATCAAGCAGTCCGGTTGCCAGGTC
ATCCAATCTGGAATTGGGACAGTCCGTAACCTTGTCAGTCTGGATCTCTCCGACAACTCG
ATGGACAATGAACTCCCAAACTTCTTCGGTTGGTTGCAGCAAAACAAATCGCTTCGCGAA
TTGAAAATCGGCCGAAACTTCTCAGGGATCAAGCAAAAAAATATGAGGCCTGTAATGGAC
AGCATCGTCGAGCTGGTCCAAGAGGAAAACTCGGTCTTGGAATGCCTGTCTCTGGCTGAT
TCGAAGTTGAGGGAGTACACCCATGTACTGCTGGGCTGTCTCGGCAGTAACACCTCGCTT
ACAGATCTCGACATAAGTGGGAATCAAATGGGGGACAGTGGTGCCCGAGTTCTCGCCAAA
TCCATCCAGATCAACTCGAAACTGCGGGTTCTGAAGTTTGACAGGAACAATCTCACAGCT
GCTGGCTTTCATGAACTTGCTGTTGCCATGGCGAAAAACTACACGCTGCGGTACATGCCG
TACCCAGTGAACGACTGTATGGGATCCATGAAGCAGCACCCGGAAAGGACACAATCGGCT
TTGGCCCAAATTCAAGACTTGCTGCTGCGAAACACCAACACCAACAGAGCGAGCAACGAC
CAGCAGTTCAGACTGCAGAAGGTCGTCACCTCAACTGCACAACAAGTGTTGGATAAAGTG
GCAGAAAAAGTTGATGACGTGATCAACGCCCTGGAGATTATCGACGCCGAATCGGAAAGC
GTCAGTTGCGTCATCGCTGGCAAGAAGTTGGTCAGGGATGCGAAAAACTCCAAAGAGCTT
TTGTCAGATATATACGGTCTTGGCATGGAAAAATCCGCTGGACCCAGCAGCCAGTTACAA
TGCAAAATATCTGAGATGGCGACCAATATGGACAAAATGGTACAAGAGCACATCAAGAGT
ACCGTTGAAGCGATGACCAAGAACGCTGAATCGCAATGCCCTCAAATATACGAGGTACGT

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[1-52] 3.0E-6
PANTHER
CARMIL1 (IPR029764) - T[2-137] 4.1E-179 - T[143-264] 4.1E-179 - T[261-637] 4.1E-179
Gene3D
LRR_dom_sf (IPR032675) - T[96-261] 1.8E-35 - T[262-511] 4.0E-68
Pfam
Leu-rich_rpt (IPR001611) - T[160-179] 0.035 - T[416-439] 3.0E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CARL1_HUMAN 38.243 % 478 4.96E-154
CARL3_HUMAN 31.096 % 338 2.87E-102
CARL2_HUMAN 30.192 % 218 2.1E-60