Login
Help

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  2. Transcript 'KH2012:KH.C5.61.v1.A...' > 
  3. Transcript 'KH2012:KH.L170.28.v3...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S8...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S5.g00126.02.t

Possible name(s)

CARMIL1; CARMIL2; CARMIL3

Gene model

Phfumi.CG.MTP2014.S5.g00126

Location

S5 [263,225 / 276,143]

Sequences

Amino acid sequence

Length: 640

>Phfumi.CG.MTP2014.S5.g00126.02.p
MEADFHFLEIKSMDSPSPDRLVMSTHSSKIFFMQMIGTDDADHIIGRVALSLRTIFPSVP
LSRILKASLEPLHRQKVIQQMLNQADQSEPGPCGNFSEMYRCVCDFLSCPVREEVEWDVD
TIYLSQNCRELSLKDFDLPDASEFAQKLATNMAENKESRIQSLDLSNNPLEDKGLIHLSG
TLPVIKHASLTDLNVARTGLTAKGVNGLCQALRSSANIMGSLTRLNLSGNCLKVDDSEGL
YNFLATENHIEELDLSATDSSVEMFFQNTLALKSIDFSGIKFPNEALKCIMDGLLSNLTK
GLEVSLNLSSCEIKQSGCQVIQSGIGTVRNLVSLDLSDNSMDNELPNFFGWLQQNKSLRE
LKIGRNFSGIKQKNMRPVMDSIVELVQEENSVLECLSLADSKLREYTHVLLGCLGSNTSL
TDLDISGNQMGDSGARVLAKSIQINSKLRVLKFDRNNLTAAGFHELAVAMAKNYTLRYMP
YPVNDCMGSMKQHPERTQSALAQIQDLLLRNTNTNRASNDQQFRLQKVVTSTAQQVLDKV
AEKVDDVINALEIIDAESESVSCVIAGKKLVRDAKNSKELLSDIYGLGMEKSAGPSSQLQ
CKISEMATNMDKMVQEHIKSTVEAMTKNAESQCPQIYEVR

Nucleotide sequence

Length: 1,920

>Phfumi.CG.MTP2014.S5.g00126.02.t
ATGGAAGCAGACTTTCACTTCCTTGAAATCAAGTCAATGGACAGTCCATCCCCAGATCGG
CTTGTGATGTCGACTCATAGTTCAAAGATATTTTTCATGCAAATGATTGGAACTGATGAT
GCAGACCACATCATTGGAAGAGTGGCTTTGTCACTTCGCACCATCTTTCCAAGTGTTCCT
TTGTCACGGATCCTAAAGGCTTCACTGGAACCTCTACATCGTCAGAAGGTTATTCAGCAA
ATGTTGAACCAGGCAGACCAGTCAGAACCTGGCCCATGTGGCAATTTCTCTGAGATGTAC
CGCTGCGTTTGTGACTTCCTTTCTTGCCCTGTGAGAGAGGAAGTGGAGTGGGATGTAGAC
ACCATCTACCTGTCACAAAACTGCAGAGAGCTCAGTTTAAAGGATTTTGACTTGCCAGAT
GCAAGTGAATTTGCTCAGAAGTTGGCAACCAACATGGCCGAAAACAAGGAGAGCCGAATT
CAGTCATTGGATCTGTCCAACAACCCCTTGGAGGACAAAGGACTTATCCATCTGAGTGGA
ACGCTGCCTGTGATAAAACATGCCAGTCTAACAGATCTCAATGTTGCTCGCACAGGCCTC
ACTGCCAAAGGTGTAAATGGTTTGTGTCAAGCTCTCAGGTCAAGTGCAAACATAATGGGC
AGTTTAACTCGCCTGAATTTGTCTGGAAACTGCCTGAAAGTGGATGATTCCGAGGGACTT
TACAACTTTTTGGCGACTGAAAATCACATTGAGGAGCTTGATCTCTCAGCCACTGACAGC
TCTGTGGAAATGTTCTTTCAAAATACTCTTGCTCTGAAGTCCATTGATTTCTCTGGCATC
AAATTTCCGAATGAAGCACTGAAGTGCATCATGGATGGCTTGCTCAGCAACTTGACGAAA
GGTCTGGAAGTTTCACTCAACCTGTCAAGCTGTGAGATCAAGCAGTCCGGTTGCCAGGTC
ATCCAATCTGGAATTGGGACAGTCCGTAACCTTGTCAGTCTGGATCTCTCCGACAACTCG
ATGGACAATGAACTCCCAAACTTCTTCGGTTGGTTGCAGCAAAACAAATCGCTTCGCGAA
TTGAAAATCGGCCGAAACTTCTCAGGGATCAAGCAAAAAAATATGAGGCCTGTAATGGAC
AGCATCGTCGAGCTGGTCCAAGAGGAAAACTCGGTCTTGGAATGCCTGTCTCTGGCTGAT
TCGAAGTTGAGGGAGTACACCCATGTACTGCTGGGCTGTCTCGGCAGTAACACCTCGCTT
ACAGATCTCGACATAAGTGGGAATCAAATGGGGGACAGTGGTGCCCGAGTTCTCGCCAAA
TCCATCCAGATCAACTCGAAACTGCGGGTTCTGAAGTTTGACAGGAACAATCTCACAGCT
GCTGGCTTTCATGAACTTGCTGTTGCCATGGCGAAAAACTACACGCTGCGGTACATGCCG
TACCCAGTGAACGACTGTATGGGATCCATGAAGCAGCACCCGGAAAGGACACAATCGGCT
TTGGCCCAAATTCAAGACTTGCTGCTGCGAAACACCAACACCAACAGAGCGAGCAACGAC
CAGCAGTTCAGACTGCAGAAGGTCGTCACCTCAACTGCACAACAAGTGTTGGATAAAGTG
GCAGAAAAAGTTGATGACGTGATCAACGCCCTGGAGATTATCGACGCCGAATCGGAAAGC
GTCAGTTGCGTCATCGCTGGCAAGAAGTTGGTCAGGGATGCGAAAAACTCCAAAGAGCTT
TTGTCAGATATATACGGTCTTGGCATGGAAAAATCCGCTGGACCCAGCAGCCAGTTACAA
TGCAAAATATCTGAGATGGCGACCAATATGGACAAAATGGTACAAGAGCACATCAAGAGT
ACCGTTGAAGCGATGACCAAGAACGCTGAATCGCAATGCCCTCAAATATACGAGGTACGT

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[1-52] 3.0E-6
PANTHER
CARMIL1 (IPR029764) - T[2-137] 4.1E-179 - T[143-264] 4.1E-179 - T[261-637] 4.1E-179
Gene3D
LRR_dom_sf (IPR032675) - T[96-261] 1.8E-35 - T[262-511] 4.0E-68
Pfam
Leu-rich_rpt (IPR001611) - T[160-179] 0.035 - T[416-439] 3.0E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CARL1_HUMAN 38.243 % 478 4.96E-154
CARL3_HUMAN 31.096 % 338 2.87E-102
CARL2_HUMAN 30.192 % 218 2.1E-60





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.