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- Transcript 'KH2012:KH.C11.535.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5.g00128.01.t
Possible name(s)
IGSF10; LRIT3; LRRC24
Gene model
Location
S5 [291,842 / 294,546]
Amino acid sequence
Length: 460
>Phfumi.CG.MTP2014.S5.g00128.01.p
SLGKIAAKMGVISLVLVISCFSLVSTSGPNKCLDCQCVSQREVSCNNLHKPPTKLKFPED
KRDYRFEHNGIVTLDVHSFNHLTHLQWIYLSNNSLTKLAGKTFYKNPGLQAVYLDHNNLT
ALPANLFSKTPELEQFYCSHNQITHIDQYVFANLTKLTQIRLANNRLVTVDPMAFHSTKV
LSTLYLEENFLETAYWTWIENMTLSANSEIELDGNRWSCDCRMWQFAHGFTSNKRHFHVV
RADQLIITTCPVGRLNLPSCIKGKVKSDFVCKKPVFDFPLNSSAVSIDVDAVEGDNVNIS
CSGNGMPIPHLTLFNEVQQILVTGKGHACFEFKAVTRDQLGKYKCMMEGADKKGHRLVVN
KTINLVLDSSSKSSVSVGTILAILLSVIFILGVASCFWRKQNRRDGYGSLDNTGGGSSAY
YELDDSSVPAQQCLNTPLEEENLFSDEEVYSKGDDKEVLV
Nucleotide sequence
Length: 1,383
>Phfumi.CG.MTP2014.S5.g00128.01.t
TCTCTTGGCAAAATTGCTGCAAAAATGGGAGTTATTTCACTTGTGTTGGTGATTTCTTGT
TTCTCACTGGTGTCAACAAGCGGACCAAATAAATGCCTTGATTGCCAGTGCGTAAGCCAA
CGCGAAGTTTCTTGCAACAATCTCCACAAACCACCGACAAAACTTAAATTTCCTGAAGAC
AAACGTGATTATCGTTTCGAGCACAACGGCATAGTTACTTTGGACGTTCATTCTTTTAAC
CACCTGACTCATTTGCAATGGATATACTTAAGCAACAACAGTCTGACAAAACTAGCTGGA
AAAACGTTTTACAAAAACCCGGGCCTACAAGCAGTGTACTTAGACCACAACAACCTCACA
GCTTTGCCTGCAAATCTATTCAGCAAAACGCCAGAACTTGAACAATTCTACTGCAGTCAC
AACCAAATCACACACATTGATCAGTATGTGTTCGCCAACTTGACGAAGCTGACACAAATT
CGCTTGGCCAATAATCGATTGGTTACTGTAGATCCGATGGCGTTTCATAGCACGAAAGTT
TTGTCCACCTTGTATTTAGAGGAAAACTTTTTAGAGACTGCGTATTGGACTTGGATTGAG
AACATGACACTGTCTGCCAATAGCGAGATTGAGCTTGACGGCAACAGATGGTCATGTGAC
TGCAGAATGTGGCAATTTGCTCACGGCTTCACATCAAATAAACGTCATTTCCATGTTGTG
CGGGCTGACCAATTAATAATTACAACTTGTCCTGTTGGCAGGTTGAATCTACCCTCGTGT
ATAAAAGGCAAAGTTAAGAGCGATTTCGTTTGCAAGAAACCCGTCTTTGACTTTCCTTTG
AATTCATCTGCTGTTTCAATTGATGTCGATGCCGTAGAAGGTGACAATGTCAACATCTCC
TGTTCCGGCAATGGAATGCCGATACCTCATCTTACGTTGTTTAACGAAGTCCAGCAGATT
TTGGTCACAGGCAAAGGGCACGCGTGTTTTGAGTTCAAGGCAGTGACTCGTGACCAGCTG
GGGAAATACAAATGTATGATGGAAGGGGCCGACAAGAAAGGGCACCGCCTAGTGGTAAAC
AAAACTATTAATCTTGTCCTTGATTCGTCGTCCAAAAGTTCTGTCAGCGTCGGTACAATC
CTTGCAATCCTTCTTTCCGTAATATTTATCCTCGGAGTAGCTTCTTGTTTTTGGAGAAAA
CAGAATAGAAGAGACGGCTACGGGTCGCTGGATAACACCGGTGGTGGGAGCTCAGCTTAT
TACGAGCTAGATGACTCCAGTGTCCCCGCACAACAATGCCTAAATACTCCCTTAGAAGAG
GAAAACCTGTTTTCTGATGAGGAGGTGTATTCAAAAGGCGACGATAAAGAAGTTTTGGTC
TGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[32-130] 4.4E-17 - T[131-273] 9.9E-22 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[82-105] 0.16 - T[107-129] 5.1 - T[130-153] 97.0 - T[154-177] 1.4 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[84-105] 7.288 - T[108-129] 5.925 - T[132-153] 6.18 - T[156-177] 5.71 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[107-167] 5.9E-13 |
| Gene3D |
Ig-like_fold (IPR013783) - T[279-361] 3.1E-5 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[288-348] 8.93E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IGS10_HUMAN | 26.562 % | 82.4 | 1.54E-16 |