- Transcript 'Phfumi.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S5.g00128.02.t
Possible name(s)
IGSF10; LRIT3; LRRC24
Gene model
Location
S5 [292,431 / 294,525]
Amino acid sequence
Length: 368
>Phfumi.CG.MTP2014.S5.g00128.02.p
KMGVISLVLVISCFSLVSTSGPNKCLDCQCVSQREVSCNNLHKPPTKLKFPEDKRDYRFE
HNGIVTLDVHSFNHLTHLQWIYLSNNSLTKLAGKTFYKNPGLQAVYLDHNNLTALPANLF
SKTPELEQFYCSHNQITHIDQYVFANLTKLTQIRLANNRLVTVDPMAFHSTKVLSTLYLE
ENFLETAYWTWIENMTLSANSEIELDGNRWSCDCRMWQFAHGFTSNKRHFHVVRADQLII
TTCPVGRLNLPSCIKGKVKSDFVCKKPVFDFPLNSSAVSIDVDAVEGDNVNISCSGNGMP
IPHLTLFNEVQQILVTGKGHACFEFKAVTRDQLGKYKCMMEGADKKGHRLVVNKTINLVL
DSSSKSSV
Nucleotide sequence
Length: 1,104
>Phfumi.CG.MTP2014.S5.g00128.02.t
AAAATGGGAGTTATTTCACTTGTGTTGGTGATTTCTTGTTTCTCACTGGTGTCAACAAGC
GGACCAAATAAATGCCTTGATTGCCAGTGCGTAAGCCAACGCGAAGTTTCTTGCAACAAT
CTCCACAAACCACCGACAAAACTTAAATTTCCTGAAGACAAACGTGATTATCGTTTCGAG
CACAACGGCATAGTTACTTTGGACGTTCATTCTTTTAACCACCTGACTCATTTGCAATGG
ATATACTTAAGCAACAACAGTCTGACAAAACTAGCTGGAAAAACGTTTTACAAAAACCCG
GGCCTACAAGCAGTGTACTTAGACCACAACAACCTCACAGCTTTGCCTGCAAATCTATTC
AGCAAAACGCCAGAACTTGAACAATTCTACTGCAGTCACAACCAAATCACACACATTGAT
CAGTATGTGTTCGCCAACTTGACGAAGCTGACACAAATTCGCTTGGCCAATAATCGATTG
GTTACTGTAGATCCGATGGCGTTTCATAGCACGAAAGTTTTGTCCACCTTGTATTTAGAG
GAAAACTTTTTAGAGACTGCGTATTGGACTTGGATTGAGAACATGACACTGTCTGCCAAT
AGCGAGATTGAGCTTGACGGCAACAGATGGTCATGTGACTGCAGAATGTGGCAATTTGCT
CACGGCTTCACATCAAATAAACGTCATTTCCATGTTGTGCGGGCTGACCAATTAATAATT
ACAACTTGTCCTGTTGGCAGGTTGAATCTACCCTCGTGTATAAAAGGCAAAGTTAAGAGC
GATTTCGTTTGCAAGAAACCCGTCTTTGACTTTCCTTTGAATTCATCTGCTGTTTCAATT
GATGTCGATGCCGTAGAAGGTGACAATGTCAACATCTCCTGTTCCGGCAATGGAATGCCG
ATACCTCATCTTACGTTGTTTAACGAAGTCCAGCAGATTTTGGTCACAGGCAAAGGGCAC
GCGTGTTTTGAGTTCAAGGCAGTGACTCGTGACCAGCTGGGGAAATACAAATGTATGATG
GAAGGGGCCGACAAGAAAGGGCACCGCCTAGTGGTAAACAAAACTATTAATCTTGTCCTT
GATTCGTCGTCCAAAAGTTCTGTC
| Gene3D |
LRR_dom_sf (IPR032675) - T[25-123] 3.9E-17 - T[124-266] 6.4E-22 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[75-98] 0.16 - T[100-122] 5.1 - T[123-146] 97.0 - T[147-170] 1.4 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[77-98] 7.288 - T[101-122] 5.925 - T[125-146] 6.18 - T[149-170] 5.71 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[100-160] 4.2E-13 |
| Gene3D |
Ig-like_fold (IPR013783) - T[272-354] 2.2E-5 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[281-341] 6.38E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRC24_HUMAN | 23.077 % | 78.6 | 7.17E-16 |
| IGS10_HUMAN | 26.006 % | 82.4 | 6.65E-17 |