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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.125.v1....' > 
  2. Transcript 'KH2012:KH.C3.225.v2....' > 
  3. Transcript 'KH2012:KH.L96.46.v1....' > 
  4. Transcript 'KH2012:KH.C1.596.v1....' > 
  5. Transcript 'Phfumi.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S616.g02420.01.t

Possible name(s)

CLVS1; RLBP1; TTPAL

Gene model

Phfumi.CG.MTP2014.S616.g02420

Location

S616 [4,883 / 5,705]

Sequences

Amino acid sequence

Length: 273

>Phfumi.CG.MTP2014.S616.g02420.01.p
MATRYECKLPHDLLEKAINELNEPRDNAERLKAIDDFRAAFKGQYPETKLQREDDVFLLR
FLRAKKFNQAKAINTLFNYLTLRPALTEVYERVKNPVLISDALNSGTVVPLSGKAKDGST
VVLGRPGLGETNLFLDLFADVVLTMEALLEREDVQICGITVIQDMAYLSMDMVKQINPLV
MKQFLSIVQDCMPVRVKGLNATNEPKIFDILYSVVYPLMREKMRKRFRLHGQDFSTLYTL
IDRNVLPPMFAGNGPEVDVEGWKNVILGEQTQL

Nucleotide sequence

Length: 822

>Phfumi.CG.MTP2014.S616.g02420.01.t
ATGGCAACTAGGTACGAGTGCAAGCTGCCCCATGATCTTCTGGAAAAAGCTATTAACGAG
TTAAACGAGCCAAGAGACAACGCCGAACGTTTGAAAGCGATCGACGATTTCCGCGCAGCA
TTTAAGGGTCAATATCCGGAAACAAAACTCCAACGCGAGGACGACGTATTTCTACTGCGA
TTTTTACGAGCAAAGAAGTTCAACCAAGCCAAAGCAATTAACACCCTGTTCAACTACTTA
ACACTGAGACCTGCATTGACTGAAGTGTATGAACGTGTTAAAAACCCCGTTCTCATCAGT
GACGCCCTTAACTCTGGGACAGTGGTACCTCTTTCCGGTAAAGCTAAAGACGGATCGACA
GTGGTGTTAGGTCGTCCTGGACTTGGGGAAACAAACCTGTTTCTTGATCTCTTTGCTGAT
GTAGTGCTGACCATGGAAGCCCTGCTTGAACGAGAAGATGTGCAGATCTGTGGTATCACT
GTGATCCAGGACATGGCCTATTTGAGTATGGATATGGTAAAACAGATCAACCCACTGGTA
ATGAAGCAATTTCTTTCCATCGTACAAGATTGCATGCCGGTCAGAGTAAAAGGTCTCAAC
GCCACAAATGAACCAAAAATATTTGACATCCTTTATTCAGTCGTGTATCCGCTGATGAGA
GAAAAAATGAGGAAACGGTTTCGTCTGCACGGGCAGGACTTCTCTACCTTGTACACCCTC
ATTGATCGGAATGTTCTTCCCCCTATGTTTGCTGGGAACGGCCCGGAGGTGGACGTCGAA
GGCTGGAAGAACGTGATACTTGGCGAACAAACACAGCTTTAG

InterProScan

SUPERFAMILY
CRAL/TRIO_N_dom_sf (IPR036273) - T[5-83] 7.32E-14
Pfam
CRAL/TRIO_N_dom (IPR011074) - T[34-76] 1.4E-7
SMART
CRAL/TRIO_N_dom (IPR011074) - T[54-79] 1.4E-6
Gene3D
CRAL-TRIO_dom_sf (IPR036865) - T[87-265] 2.8E-43
SMART
CRAL-TRIO_dom (IPR001251) - T[95-255] 3.6E-14
ProSiteProfiles
CRAL-TRIO_dom (IPR001251) - T[96-258] 13.792
CDD
CRAL-TRIO_dom (IPR001251) - T[99-253] 2.49521E-22
SUPERFAMILY
CRAL-TRIO_dom_sf (IPR036865) - T[100-255] 3.53E-33
Pfam
CRAL-TRIO_dom (IPR001251) - T[103-252] 1.8E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TTPAL_HUMAN 33.209 % 164 7.29E-49
RLBP1_HUMAN 27.899 % 124 9.19E-34
CLVS1_HUMAN 30.37 % 125 5.58E-34