- Clone 'cien160444' >
- Transcript 'Phfumi.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S626.g02442.01.t
Possible name(s)
KDM2A; KDM2B; PHF8
Gene model
Location
S626 [8,091 / 11,604]
Amino acid sequence
Length: 875
>Phfumi.CG.MTP2014.S626.g02442.01.p
MGERYLRHKSVPVYDDDDAVLDEIDGKRTYDIQDKLTSIKYNADFLVDLQGNEMTFERIQ
RVGLTHPIRIKNKDGLGLTVPDSSNFSVSNVRAMVGSRRMVDVMECKTQRALEMSMRDFE
QYFEGKDRRHIYNVISLEFSQSRLESLVQRPKVIDCLDWIDLVWPQHLKLNQTEQTNKLV
HMKYPKVQKYCLMSVAGCYTDFHIDFGGTSVWYHILKGGKVFWLIEPTNENLSLYERWTM
SGNQGDIFFGDMVSTCQRIELKAGNSLVIPSGWIHAVHTPLDSIVFGGNFLHSFNIPMQL
RIAQVEERLHVPNRFRFPFFSEVLWYALERYVHCFTGNTYLDEEYQSKNLGNSKQSADEK
ENKEYVHLTPFEYKGLQKMIETLEYLPKNKRSIPEGIVRGEELLEAAKKLLYNHSGDDHE
LAVTGKAKSFWPAVHRPDSAKVIRKPKPYSTPAYKKPSGTGRVRRVRCKQCEACLRDDCM
ECAFCKDMRKHGGPGTMKQTCIMRRCLNPILPSTVKDESIVESPTVPTPPVVESPAPKPG
KRGRKRAGSNESDATVKVTKVEPEIIPDEESPPPRPVIPRVFVTRVPANELSRYAIRPQE
PATESEEFPNAKAWQHVFKYLSHKDLVNCMLVCKDFLRWCGAPTLWSKIDLTDSKISSVM
LQTLVRRAPTSLNLSQTNPRYKQLLWLIERMPSLRELYLVRCSWAAVAALGTAACPPLRL
LDLSWTSGFTDSHLKQLLSTPTDARPGQKINHTRLRFCKDLNLTGTDITDLGVKLITNTL
PHLKSLNVSFCPLTDEGFHNILNPNCSGQYMLTTVVAQHCPRLTDAALDTTTKMHEIVEI
DVRGCEEISAGACRAFVASSKLQLAIRDSFVIVGL
Nucleotide sequence
Length: 2,628
>Phfumi.CG.MTP2014.S626.g02442.01.t
ATGGGTGAACGTTATCTAAGACATAAATCAGTTCCTGTTTATGATGACGACGATGCAGTG
CTTGATGAAATTGATGGAAAACGTACCTACGATATACAAGATAAGCTTACCAGCATCAAA
TACAATGCCGATTTCCTCGTTGACCTGCAGGGAAATGAGATGACATTTGAACGCATACAG
AGAGTAGGGCTGACGCACCCAATTCGTATCAAGAACAAAGATGGTTTGGGCCTCACAGTT
CCAGACAGTTCAAATTTCAGTGTCTCCAATGTCCGTGCAATGGTGGGAAGTCGTCGGATG
GTCGACGTTATGGAATGTAAAACACAAAGAGCGCTGGAAATGTCCATGAGGGATTTTGAG
CAATACTTTGAAGGCAAAGATAGAAGACACATTTACAATGTGATATCCCTGGAATTTTCA
CAATCACGGCTGGAGAGTTTGGTGCAGCGACCAAAGGTGATAGACTGTCTTGATTGGATT
GACCTGGTTTGGCCCCAACATCTTAAATTGAACCAGACTGAACAAACAAACAAACTGGTA
CACATGAAGTATCCCAAAGTACAAAAGTATTGTCTGATGTCTGTGGCTGGATGTTATACA
GACTTTCACATTGACTTTGGAGGGACTTCTGTCTGGTATCATATACTTAAAGGTGGAAAA
GTATTTTGGTTGATTGAGCCCACCAACGAAAACCTGAGCTTATATGAGCGATGGACAATG
TCTGGAAACCAAGGTGATATTTTCTTTGGGGACATGGTGTCAACATGTCAAAGAATTGAG
TTGAAGGCAGGAAATTCCCTTGTAATTCCAAGTGGTTGGATACATGCAGTTCACACCCCA
CTTGATTCTATTGTATTCGGAGGTAACTTTCTACATTCTTTTAATATTCCAATGCAGTTA
AGAATTGCACAAGTTGAAGAGAGACTGCATGTGCCAAATCGATTTCGTTTTCCCTTCTTT
TCTGAAGTTCTTTGGTACGCCTTGGAGAGATATGTTCATTGTTTTACTGGTAACACTTAC
TTGGATGAGGAGTACCAGAGTAAAAACTTGGGTAACAGCAAACAGAGCGCTGATGAAAAA
GAAAACAAGGAATATGTTCATTTGACCCCGTTTGAGTACAAGGGACTTCAGAAAATGATT
GAGACTTTAGAGTACCTACCAAAAAACAAGCGAAGCATCCCTGAAGGCATAGTGAGAGGA
GAAGAATTGCTAGAAGCAGCAAAGAAATTACTCTACAACCATTCTGGCGATGACCATGAA
TTGGCGGTCACTGGAAAAGCAAAATCATTTTGGCCTGCTGTTCATCGACCTGATTCTGCA
AAAGTTATAAGAAAGCCGAAACCATATTCAACTCCAGCATATAAGAAACCCAGTGGCACT
GGCAGAGTGCGCCGCGTTCGTTGCAAACAGTGTGAGGCATGTCTTCGTGATGACTGTATG
GAATGCGCATTCTGCAAAGACATGAGGAAACATGGGGGCCCTGGAACAATGAAGCAGACC
TGCATTATGCGAAGATGTCTAAATCCAATTCTGCCATCAACCGTTAAGGACGAGTCCATT
GTTGAGTCTCCAACAGTCCCAACTCCACCAGTTGTGGAATCTCCTGCCCCTAAACCTGGA
AAAAGGGGAAGAAAAAGAGCTGGATCTAATGAGAGTGACGCAACTGTGAAAGTTACAAAA
GTTGAACCAGAAATTATTCCTGATGAGGAATCTCCACCTCCAAGACCAGTTATTCCCAGA
GTTTTTGTGACAAGAGTGCCTGCAAATGAACTAAGTCGTTATGCAATCAGGCCACAGGAG
CCAGCGACTGAATCTGAGGAGTTTCCCAATGCCAAAGCATGGCAGCATGTGTTCAAATAC
CTGTCTCATAAGGACTTGGTGAACTGTATGTTGGTATGCAAGGATTTCCTGCGCTGGTGT
GGAGCACCAACACTGTGGTCCAAGATTGACCTGACAGATTCTAAAATCAGCAGTGTGATG
TTGCAAACTCTGGTGCGGAGGGCTCCAACGTCACTTAATCTTTCCCAGACCAACCCAAGA
TACAAGCAACTGCTGTGGTTAATTGAAAGAATGCCTTCATTGAGGGAACTCTACTTAGTA
AGATGCTCATGGGCAGCTGTAGCTGCATTGGGAACAGCAGCCTGTCCACCGTTGCGACTG
CTTGATTTGTCATGGACATCTGGTTTTACAGATTCACATTTGAAGCAACTGTTATCCACT
CCAACAGATGCCCGTCCTGGCCAGAAAATCAACCACACTCGTCTTCGCTTCTGCAAAGAT
CTTAACCTCACAGGGACCGACATCACAGACCTTGGTGTCAAGTTGATTACAAACACTCTA
CCTCATTTGAAATCTCTTAATGTCAGTTTTTGTCCCTTAACAGACGAAGGCTTTCACAAT
ATTCTGAACCCAAACTGTTCTGGCCAATACATGCTGACGACGGTCGTGGCTCAACACTGT
CCCAGACTGACAGACGCAGCACTGGACACCACAACAAAAATGCATGAAATTGTTGAGATA
GATGTACGAGGCTGTGAAGAAATAAGTGCAGGAGCTTGCAGGGCATTTGTTGCCAGTTCA
AAACTCCAGTTGGCGATTCGTGATTCTTTTGTGATTGTTGGCTTGTAG
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[139-307] 27.377 |
| SMART |
JmjC_dom (IPR003347) - T[139-307] 3.9E-32 |
| Pfam |
JmjC_dom (IPR003347) - T[190-290] 8.9E-6 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[461-507] 12.616 |
| Pfam |
Znf_CXXC (IPR002857) - T[462-506] 7.9E-13 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[611-868] 6.5E-40 |
| Pfam |
F-box_dom (IPR001810) - T[611-650] 8.0E-8 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[691-713] 290.0 - T[715-740] 8.2 - T[780-804] 15.0 - T[834-859] 120.0 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[781-797] 0.0043 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KDM2A_HUMAN | 45.652 % | 501 | 1.58E-161 |
| KDM2B_HUMAN | 55.718 % | 422 | 3.35E-130 |
| PHF8_HUMAN | 43.636 % | 296 | 7.77E-86 |