- Transcript 'Moocul.CG.ELv1_2.S13...' >
- Transcript 'Cisavi.CG.ENS81.R17....' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L13.4.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S626.g02442.02.t
Possible name(s)
KDM2A; KDM2B; PHF8
Gene model
Location
S626 [8,091 / 12,551]
Amino acid sequence
Length: 984
>Phfumi.CG.MTP2014.S626.g02442.02.p
MGERYLRHKSVPVYDDDDAVLDEIDGKRTYDIQDKLTSIKYNADFLVDLQGNEMTFERIQ
RVGLTHPIRIKNKDGLGLTVPDSSNFSVSNVRAMVGSRRMVDVMECKTQRALEMSMRDFE
QYFEGKDRRHIYNVISLEFSQSRLESLVQRPKVIDCLDWIDLVWPQHLKLNQTEQTNKLV
HMKYPKVQKYCLMSVAGCYTDFHIDFGGTSVWYHILKGGKVFWLIEPTNENLSLYERWTM
SGNQGDIFFGDMVSTCQRIELKAGNSLVIPSGWIHAVHTPLDSIVFGGNFLHSFNIPMQL
RIAQVEERLHVPNRFRFPFFSEVLWYALERYVHCFTGNTYLDEEYQSKNLGNSKQSADEK
ENKEYVHLTPFEYKGLQKMIETLEYLPKNKRSIPEGIVRGEELLEAAKKLLYNHSGDDHE
LAVTGKAKSFWPAVHRPDSAKVIRKPKPYSTPAYKKPSGTGRVRRVRCKQCEACLRDDCM
ECAFCKDMRKHGGPGTMKQTCIMRRCLNPILPSTVKDESIVESPTVPTPPVVESPAPKPG
KRGRKRAGSNESDATVKVTKVEPEIIPDEESPPPRPVIPRVFVTRVPANELSRYAIRPQE
PATESEEFPNAKAWQHVFKYLSHKDLVNCMLVCKDFLRWCGAPTLWSKIDLTDSKISSVM
LQTLVRRAPTSLNLSQTNPRYKQLLWLIERMPSLRELYLVRCSWAAVAALGTAACPPLRL
LDLSWTSGFTDSHLKQLLSTPTDARPGQKINHTRLRFCKDLNLTGTDITDLGVKLITNTL
PHLKSLNVSFCPLTDEGFHNILNPNCSGQYMLTTVVAQHCPRLTDAALDTTTKMHEIVEI
DVRGCEEISAGACRAFVASSKLQLAIRDSFVIVGFNVWQSIQRQNAKLMLGNVRPMSTDV
DTQFATAKEKLNTLKEDPGNDVKLKMYALFKQATIGENKTEKPGTFNFVGQAKWKAWSSL
GSMSQDEAKTEYAKIVDELAAKEN
Nucleotide sequence
Length: 2,955
>Phfumi.CG.MTP2014.S626.g02442.02.t
ATGGGTGAACGTTATCTAAGACATAAATCAGTTCCTGTTTATGATGACGACGATGCAGTG
CTTGATGAAATTGATGGAAAACGTACCTACGATATACAAGATAAGCTTACCAGCATCAAA
TACAATGCCGATTTCCTCGTTGACCTGCAGGGAAATGAGATGACATTTGAACGCATACAG
AGAGTAGGGCTGACGCACCCAATTCGTATCAAGAACAAAGATGGTTTGGGCCTCACAGTT
CCAGACAGTTCAAATTTCAGTGTCTCCAATGTCCGTGCAATGGTGGGAAGTCGTCGGATG
GTCGACGTTATGGAATGTAAAACACAAAGAGCGCTGGAAATGTCCATGAGGGATTTTGAG
CAATACTTTGAAGGCAAAGATAGAAGACACATTTACAATGTGATATCCCTGGAATTTTCA
CAATCACGGCTGGAGAGTTTGGTGCAGCGACCAAAGGTGATAGACTGTCTTGATTGGATT
GACCTGGTTTGGCCCCAACATCTTAAATTGAACCAGACTGAACAAACAAACAAACTGGTA
CACATGAAGTATCCCAAAGTACAAAAGTATTGTCTGATGTCTGTGGCTGGATGTTATACA
GACTTTCACATTGACTTTGGAGGGACTTCTGTCTGGTATCATATACTTAAAGGTGGAAAA
GTATTTTGGTTGATTGAGCCCACCAACGAAAACCTGAGCTTATATGAGCGATGGACAATG
TCTGGAAACCAAGGTGATATTTTCTTTGGGGACATGGTGTCAACATGTCAAAGAATTGAG
TTGAAGGCAGGAAATTCCCTTGTAATTCCAAGTGGTTGGATACATGCAGTTCACACCCCA
CTTGATTCTATTGTATTCGGAGGTAACTTTCTACATTCTTTTAATATTCCAATGCAGTTA
AGAATTGCACAAGTTGAAGAGAGACTGCATGTGCCAAATCGATTTCGTTTTCCCTTCTTT
TCTGAAGTTCTTTGGTACGCCTTGGAGAGATATGTTCATTGTTTTACTGGTAACACTTAC
TTGGATGAGGAGTACCAGAGTAAAAACTTGGGTAACAGCAAACAGAGCGCTGATGAAAAA
GAAAACAAGGAATATGTTCATTTGACCCCGTTTGAGTACAAGGGACTTCAGAAAATGATT
GAGACTTTAGAGTACCTACCAAAAAACAAGCGAAGCATCCCTGAAGGCATAGTGAGAGGA
GAAGAATTGCTAGAAGCAGCAAAGAAATTACTCTACAACCATTCTGGCGATGACCATGAA
TTGGCGGTCACTGGAAAAGCAAAATCATTTTGGCCTGCTGTTCATCGACCTGATTCTGCA
AAAGTTATAAGAAAGCCGAAACCATATTCAACTCCAGCATATAAGAAACCCAGTGGCACT
GGCAGAGTGCGCCGCGTTCGTTGCAAACAGTGTGAGGCATGTCTTCGTGATGACTGTATG
GAATGCGCATTCTGCAAAGACATGAGGAAACATGGGGGCCCTGGAACAATGAAGCAGACC
TGCATTATGCGAAGATGTCTAAATCCAATTCTGCCATCAACCGTTAAGGACGAGTCCATT
GTTGAGTCTCCAACAGTCCCAACTCCACCAGTTGTGGAATCTCCTGCCCCTAAACCTGGA
AAAAGGGGAAGAAAAAGAGCTGGATCTAATGAGAGTGACGCAACTGTGAAAGTTACAAAA
GTTGAACCAGAAATTATTCCTGATGAGGAATCTCCACCTCCAAGACCAGTTATTCCCAGA
GTTTTTGTGACAAGAGTGCCTGCAAATGAACTAAGTCGTTATGCAATCAGGCCACAGGAG
CCAGCGACTGAATCTGAGGAGTTTCCCAATGCCAAAGCATGGCAGCATGTGTTCAAATAC
CTGTCTCATAAGGACTTGGTGAACTGTATGTTGGTATGCAAGGATTTCCTGCGCTGGTGT
GGAGCACCAACACTGTGGTCCAAGATTGACCTGACAGATTCTAAAATCAGCAGTGTGATG
TTGCAAACTCTGGTGCGGAGGGCTCCAACGTCACTTAATCTTTCCCAGACCAACCCAAGA
TACAAGCAACTGCTGTGGTTAATTGAAAGAATGCCTTCATTGAGGGAACTCTACTTAGTA
AGATGCTCATGGGCAGCTGTAGCTGCATTGGGAACAGCAGCCTGTCCACCGTTGCGACTG
CTTGATTTGTCATGGACATCTGGTTTTACAGATTCACATTTGAAGCAACTGTTATCCACT
CCAACAGATGCCCGTCCTGGCCAGAAAATCAACCACACTCGTCTTCGCTTCTGCAAAGAT
CTTAACCTCACAGGGACCGACATCACAGACCTTGGTGTCAAGTTGATTACAAACACTCTA
CCTCATTTGAAATCTCTTAATGTCAGTTTTTGTCCCTTAACAGACGAAGGCTTTCACAAT
ATTCTGAACCCAAACTGTTCTGGCCAATACATGCTGACGACGGTCGTGGCTCAACACTGT
CCCAGACTGACAGACGCAGCACTGGACACCACAACAAAAATGCATGAAATTGTTGAGATA
GATGTACGAGGCTGTGAAGAAATAAGTGCAGGAGCTTGCAGGGCATTTGTTGCCAGTTCA
AAACTCCAGTTGGCGATTCGTGATTCTTTTGTGATTGTTGGCTTCAACGTTTGGCAATCG
ATCCAACGTCAAAATGCTAAACTTATGCTTGGGAACGTGAGGCCAATGTCAACCGACGTT
GACACACAATTTGCAACTGCAAAAGAAAAACTGAACACGTTAAAAGAAGACCCGGGAAAC
GATGTTAAACTGAAGATGTACGCGCTGTTCAAGCAAGCAACCATTGGTGAAAACAAGACC
GAAAAGCCTGGGACATTTAATTTCGTTGGACAAGCAAAGTGGAAAGCTTGGAGTTCGCTT
GGTTCTATGAGTCAGGATGAAGCAAAAACTGAGTATGCAAAAATAGTGGATGAACTTGCT
GCAAAGGAAAACTGA
| SMART |
JmjC_dom (IPR003347) - T[139-307] 3.9E-32 |
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[139-307] 27.377 |
| Pfam |
JmjC_dom (IPR003347) - T[190-290] 1.0E-5 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[461-507] 12.616 |
| Pfam |
Znf_CXXC (IPR002857) - T[462-506] 9.1E-13 |
| Pfam |
F-box_dom (IPR001810) - T[611-650] 9.4E-8 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[611-872] 7.1E-40 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[691-713] 290.0 - T[715-740] 8.2 - T[780-804] 15.0 - T[834-859] 120.0 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[781-797] 0.0049 |
| Gene3D |
FERM/acyl-CoA-bd_prot_sf (IPR014352) - T[891-984] 2.3E-30 |
| ProSiteProfiles |
Acyl-CoA-binding_protein (IPR000582) - T[900-984] 35.386 |
| CDD |
Acyl-CoA-binding_protein (IPR000582) - T[900-983] 6.24912E-35 |
| SUPERFAMILY |
Acyl-CoA-binding_sf (IPR035984) - T[901-981] 4.45E-25 |
| PRINTS |
Acyl-CoA-binding_protein (IPR000582) - T[901-916] 2.0E-15 - T[918-936] 2.0E-15 - T[941-956] 2.0E-15 - T[962-979] 2.0E-15 |
| Pfam |
Acyl-CoA-binding_protein (IPR000582) - T[902-980] 3.1E-24 |
| ProSitePatterns |
Acyl-CoA-binding_prot_CS (IPR022408) - T[918-936] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KDM2A_HUMAN | 45.652 % | 502 | 1.61E-160 |
| KDM2B_HUMAN | 55.718 % | 424 | 1.07E-129 |
| PHF8_HUMAN | 43.636 % | 296 | 2.64E-85 |