- Transcript 'Cisavi.CG.ENS81.R49....' >
- Transcript 'KH2012:KH.L165.4.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S6332.g07320.01.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
S6332 [1,551 / 7,411]
Amino acid sequence
Length: 479
>Phfumi.CG.MTP2014.S6332.g07320.01.p
HRGNDMFESSVSWLNVGSNPLFFRFGPYKLVGYCNAAGRIRRCGGYRIKRKQCERFRCCW
NENSNSCYRAKFHILNYPLTQGSWSNWSPWSSCAAATVCSAGTQVRTRQCTDGTAGQGGC
KGVASESQSCSMCTNSWSTWGTWSVCSSSDVPCLVGSRSRSRTCANSLGVVQATTSCPGG
SASATQTGTCNTNLCPSFTAWTTGACTVTCGSGTKTQTRTCTTTPTTTLPSQCYSTTLTC
NTNSCSQDKNLDLMILLDSTTQLDDCTTKSFNLQFNAPITVASGLLTSANFPNFMQQNSL
VSTILSSWKTVFPGMTQVGILQQSDRCDIADPATLNSVHQFGLPYVPGTVLQTEYLCGSD
DRYSQLTCGVSSLNSVLNRADVPDVIIQFIPDVTQLNPTYLRIYRQLLGAVATLIQSKRL
LVVSAAQITAATQAENVLFGQQWACGSLTPTSPCNSYYLGNIYDAAGVLANMRLAVSTL
Nucleotide sequence
Length: 1,440
>Phfumi.CG.MTP2014.S6332.g07320.01.t
CACCGAGGCAACGACATGTTCGAATCAAGTGTTTCGTGGCTGAATGTGGGAAGTAATCCT
CTGTTTTTCCGTTTCGGACCTTACAAATTAGTCGGTTACTGCAATGCTGCCGGAAGAATC
AGGCGATGCGGAGGTTACCGTATTAAGCGAAAACAGTGCGAAAGATTTCGTTGCTGTTGG
AACGAGAACAGCAATAGCTGCTACAGAGCCAAGTTCCACATTCTCAATTATCCATTAACA
CAAGGTAGCTGGTCGAATTGGTCGCCTTGGTCTAGTTGTGCTGCGGCTACAGTCTGTTCG
GCAGGAACACAAGTTCGAACGCGTCAATGTACTGACGGAACAGCTGGCCAGGGCGGCTGC
AAAGGAGTTGCATCTGAAAGTCAGTCATGCTCGATGTGCACAAACAGTTGGTCAACCTGG
GGCACATGGTCAGTTTGTTCAAGTTCCGATGTTCCCTGCCTGGTTGGATCACGCAGCAGA
TCCCGTACTTGCGCAAACTCTCTCGGGGTTGTTCAGGCCACTACATCTTGCCCTGGCGGA
AGCGCCTCCGCGACACAGACCGGAACTTGCAACACCAATCTCTGCCCCTCGTTCACTGCT
TGGACAACCGGAGCATGTACAGTAACCTGCGGCAGTGGAACTAAAACCCAAACTCGAACA
TGTACCACAACTCCCACGACCACCCTTCCAAGTCAATGTTACTCTACAACTTTAACTTGC
AACACAAACTCGTGCAGCCAGGACAAAAATCTTGATTTGATGATACTTTTGGATTCAACC
ACACAGTTGGACGATTGTACCACTAAGTCGTTTAACCTTCAATTTAACGCCCCCATCACC
GTGGCTAGCGGTTTGTTGACATCCGCAAACTTTCCGAACTTCATGCAACAAAACTCGTTG
GTTTCAACAATTCTATCGTCATGGAAAACTGTCTTCCCTGGAATGACACAAGTCGGAATT
CTTCAGCAGTCTGACAGATGCGACATCGCCGATCCAGCCACTTTAAACAGTGTTCATCAG
TTTGGACTCCCCTACGTGCCTGGAACGGTGCTACAAACAGAATACCTCTGCGGTTCGGAC
GACAGATACTCCCAACTCACTTGCGGAGTTTCGTCATTAAACTCAGTCCTTAACCGGGCT
GATGTTCCTGACGTCATCATCCAGTTCATACCGGACGTTACGCAACTTAATCCAACATAC
CTGAGAATTTACCGCCAACTGCTCGGCGCGGTTGCGACACTGATCCAGTCGAAACGATTG
TTGGTCGTCAGTGCGGCTCAAATTACTGCGGCAACACAAGCTGAAAACGTCCTATTTGGA
CAACAATGGGCTTGCGGGAGTCTCACTCCGACTTCTCCATGCAACAGTTATTACCTCGGA
AACATCTATGATGCTGCTGGAGTTCTAGCAAACATGCGACTAGCAGTTTCTACACTGTAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[80-133] 7.1E-8 - T[134-196] 1.2E-5 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[81-134] 10.041 - T[135-196] 9.578 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[82-130] 1.15E-6 |
| SMART |
TSP1_rpt (IPR000884) - T[84-134] 0.0057 - T[137-196] 7.7E-5 - T[198-246] 0.44 |
| Pfam |
TSP1_rpt (IPR000884) - T[85-132] 2.3E-5 - T[138-195] 0.0056 - T[204-245] 0.012 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 32.418 % | 88.2 | 3.1E-18 |