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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. EST 'AHC0AAA223YC21_RM1' > 
  3. Transcript 'Phfumi.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6496.g07388.02.t

Possible name(s)

EXOSC1; EXOSC2

Gene model

Phfumi.CG.MTP2014.S6496.g07388

Location

S6496 [836 / 2,442]

Sequences

Amino acid sequence

Length: 198

>Phfumi.CG.MTP2014.S6496.g07388.02.p
MEHILGQKCIPGERLTSVETCRSGPGTYQRQGYIFASLTGVVCKEEKKTDLPTIYIASRH
KAQSVPEVGNIVTCKITQISSRFAKCQITAVNNCNLAHAFRGMIRREDVRSTERDKVEIF
KSFRPGDIVLAKVLSLGDAQWYLLTTAENELGVVVAQSESGTTLTALSHNEMQCPVTHVK
ESRKVARPQKEHIRFPDR

Nucleotide sequence

Length: 597

>Phfumi.CG.MTP2014.S6496.g07388.02.t
ATGGAGCATATTCTTGGACAAAAATGCATACCTGGTGAGAGGTTAACCAGTGTTGAAACA
TGTCGTAGTGGGCCTGGCACTTACCAACGCCAAGGTTATATTTTTGCCTCTCTCACTGGA
GTTGTGTGCAAAGAAGAAAAGAAAACAGATCTTCCAACAATATACATTGCATCAAGACAC
AAAGCACAGAGTGTCCCAGAAGTTGGAAACATTGTGACTTGCAAGATCACACAAATTTCC
TCAAGGTTTGCCAAATGTCAAATAACAGCAGTGAACAACTGCAATTTGGCCCATGCATTC
CGTGGCATGATACGCAGAGAGGATGTGCGATCAACTGAGCGCGACAAAGTGGAAATTTTT
AAATCTTTTCGTCCTGGTGACATTGTTCTCGCTAAAGTGCTTTCTCTGGGTGATGCTCAG
TGGTACCTTTTGACAACTGCTGAAAACGAGCTTGGAGTGGTTGTGGCCCAAAGCGAAAGT
GGAACCACACTCACCGCCCTCAGCCACAATGAGATGCAATGCCCAGTGACACATGTAAAG
GAAAGTCGAAAAGTTGCTCGACCGCAAAAAGAACACATCCGTTTTCCGGACAGATAA

InterProScan

Pfam
Exosome_cplx_N_dom (IPR025721) - T[9-42] 9.3E-11
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[64-185] 9.23E-34
Pfam
EXOSC1 (IPR019495) - T[96-136] 1.0E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOS1_HUMAN 59.893 % 223 1.29E-74