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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.417.v1...' > 
  2. Clone 'citb035f22' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S667.g02513.01.t

Possible name(s)

DLK2; DLL4; SNED1

Gene model

Phfumi.CG.MTP2014.S667.g02513

Location

S667 [12,766 / 16,453]

Sequences

Amino acid sequence

Length: 427

>Phfumi.CG.MTP2014.S667.g02513.01.p
MQYCERHEPCSNGAECVNNRRGGYVCVCTDGFTGKNCDVELRPSTVQSAPTTPRQDSAAD
FSHMCRNGGTCLYGNQIVGCEKCACPDGYGGSHCEAFLRMCNTRPCANGGTCENVAGGFK
CQCTPGYTGRDCTVDVNECVELGSEACANNGRCVNNIGSYDCLCTKGYEGTRCEMPTRRM
PPRNHFTGFKRFFPTLATASTTSTKTESAGVYNGEIEKAPVRPSLKETVEYKNAAESERR
IVTNVKVTHIVEQVVDSPAVGQPPSGQASVSVVQAVTFAFLGVAVALFIGIAAFLWFHCS
RRHHNQAAGRQCADTEATVASRAPSVYSQPPPDNRNSFVAAQELSSKQRDSAYLKTTSGD
FVQTEAPRQHRQPRPGSVVRTTVSAQRPVDCLYVALPQEGNVARHAERDTMHVEESRAFL
PHGRSMH

Nucleotide sequence

Length: 1,570

>Phfumi.CG.MTP2014.S667.g02513.01.t
ATGACAGACTTGACTGCGCATATTTTCACCCACTTGCCGATGGAAAGCGCTTTGCTTGTC
CGGTTTAAAGGCGCCTGGTAAAACCACTGAGGTCCCGTGCCCACAACGCTGCAACCTGTT
CAATGGAGTTTGCTCTCCCGACGGACAATGCAGGTGTGACCAAGGCTGGGAAGGGGAAAA
TTGCAGCCAATGCACCAAAAAGACCGGATGCGTACATGGCTCGTGTGACCAGCCCTGGCA
ATGCAACTGTGATGAAGGATGGGGTGGAAAGAATTGCGATGAAGACATGCAGTACTGTGA
ACGTCACGAACCTTGTTCCAACGGTGCCGAGTGCGTGAACAACCGTAGAGGAGGTTATGT
GTGCGTTTGCACTGATGGCTTCACTGGTAAAAACTGCGACGTTGAATTGCGACCAAGCAC
TGTCCAATCAGCGCCGACCACTCCACGACAGGATTCTGCAGCCGATTTCAGCCACATGTG
CAGAAATGGTGGAACTTGCCTGTACGGAAACCAAATCGTCGGTTGCGAAAAATGCGCATG
TCCCGATGGTTACGGAGGCTCACATTGCGAAGCTTTCCTCCGAATGTGCAACACCCGGCC
CTGTGCTAACGGTGGAACCTGCGAAAACGTGGCTGGTGGGTTCAAATGCCAGTGCACACC
CGGCTACACGGGTCGCGACTGCACAGTGGATGTCAATGAATGTGTAGAATTGGGGTCAGA
AGCTTGCGCCAACAATGGTCGCTGTGTTAACAACATCGGTTCGTACGACTGCTTGTGCAC
GAAGGGATATGAGGGCACGCGATGCGAGATGCCTACAAGACGTATGCCTCCGCGTAACCA
CTTCACCGGTTTCAAACGGTTCTTCCCCACACTCGCAACTGCTTCCACCACCAGTACTAA
AACGGAGTCGGCAGGAGTTTACAATGGCGAAATTGAAAAAGCACCCGTGCGCCCGTCTTT
GAAGGAAACCGTGGAGTACAAGAACGCAGCCGAATCCGAGAGACGGATCGTGACCAACGT
AAAAGTCACTCACATCGTGGAACAAGTCGTCGATTCACCCGCCGTCGGCCAGCCGCCGTC
TGGACAAGCCTCTGTCTCTGTGGTCCAAGCGGTCACTTTCGCCTTCCTCGGGGTCGCAGT
CGCTTTGTTCATCGGCATCGCGGCCTTCTTGTGGTTCCACTGTTCCCGGCGCCATCACAA
CCAGGCCGCCGGACGCCAATGTGCGGACACAGAAGCCACTGTCGCGTCGCGCGCGCCCAG
TGTGTATTCTCAACCGCCCCCTGACAACCGCAACAGCTTTGTGGCAGCGCAGGAATTGTC
GAGCAAACAACGAGACAGCGCGTACTTGAAAACGACCAGCGGGGATTTCGTACAAACCGA
AGCTCCACGACAGCACAGGCAGCCGCGGCCTGGCAGCGTGGTGAGAACGACGGTCTCCGC
GCAACGACCGGTCGACTGTCTCTACGTCGCTTTACCACAAGAAGGAAACGTCGCGCGACA
CGCCGAACGCGACACGATGCACGTGGAAGAATCGCGCGCCTTTTTGCCTCACGGTCGTTC
GATGCACTGA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[1-38] 17.71 - T[54-95] 11.273 - T[97-133] 19.881 - T[135-174] 19.541
SMART
EGF-like_dom (IPR000742) - T[3-38] 1.8E-5 - T[62-95] 75.0 - T[100-133] 3.3E-5 - T[138-174] 3.6E-5
SMART
EGF-like_Ca-bd_dom (IPR001881) - T[4-38] 0.0011 - T[101-133] 1.0E-4 - T[135-174] 1.6E-11
Pfam
EGF-like_dom (IPR000742) - T[4-36] 2.4E-7 - T[101-130] 3.1E-7
ProSitePatterns
EGF-like_CS (IPR013032) - T[26-37] . - T[26-37] . - T[83-94] . - T[83-94] . - T[121-132] . - T[121-132] . - T[162-173] . - T[162-173] .
SUPERFAMILY
Growth_fac_rcpt_cys_sf (IPR009030) - T[69-174] 8.79E-10
ProSitePatterns
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[112-123] . - T[153-164] .
ProSitePatterns
EGF_Ca-bd_CS (IPR018097) - T[135-162] .
Pfam
EGF-like_Ca-bd_dom (IPR001881) - T[135-171] 2.9E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLK2_HUMAN 30.894 % 107 1.12E-25
SNED1_HUMAN 34.807 % 109 2.02E-25
DLL4_HUMAN 39.548 % 110 3.77E-26