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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA191YD19' > 
  2. Transcript 'Phfumi.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6842.g07524.01.t

Possible name(s)

RAB11A; RAB11B; RAB6A

Gene model

Phfumi.CG.MTP2014.S6842.g07524

Location

S6842 [4,965 / 7,400]

Sequences

Amino acid sequence

Length: 243

>Phfumi.CG.MTP2014.S6842.g07524.01.p
QDMSCDAFFRETPASPNNIIKLVVIGDSGAGKSQLVSRFVRDQFSEEPESTVGLDFAVKT
VKVGDKVIRVQIWDLAGKNMFRNLTSSYYREAAAALVVYDITKVRSFENASRWIKDLRCY
SGCDVTMLVGNKLDLRHQRSIPSADGIKLAKEQGAMFIETSAKDSTHVKKAFHRLMEQAS
DTLAKKQQLEYGVQHGGGLQQGSDALSVTKPKEVAHRTVVQQQPKNEKFTIRKVAQTCLS
ETK

Nucleotide sequence

Length: 729

>Phfumi.CG.MTP2014.S6842.g07524.01.t
CAAGATATGTCGTGCGACGCTTTCTTCCGTGAAACACCTGCGTCCCCGAACAACATCATA
AAACTGGTTGTAATTGGGGATTCGGGTGCGGGAAAGTCCCAACTTGTGTCTCGCTTCGTT
CGCGATCAGTTCAGTGAAGAACCGGAATCGACAGTGGGTCTGGATTTCGCCGTGAAAACA
GTGAAGGTCGGCGACAAGGTCATTCGCGTGCAAATATGGGATTTGGCGGGAAAAAATATG
TTCAGGAACCTAACCTCCTCGTACTATCGTGAAGCAGCGGCGGCGTTGGTCGTTTATGAC
ATCACAAAGGTGCGCTCTTTCGAAAACGCGTCGCGGTGGATCAAAGACCTTCGGTGTTAC
AGCGGCTGTGACGTCACAATGCTGGTTGGCAACAAACTCGACCTACGCCATCAGCGCTCG
ATCCCATCCGCGGACGGTATAAAACTGGCAAAAGAGCAGGGAGCCATGTTCATCGAAACA
TCGGCCAAAGACTCGACGCACGTGAAGAAAGCGTTTCACCGCTTGATGGAGCAAGCGAGC
GACACTCTTGCGAAAAAACAGCAACTCGAATACGGAGTGCAACACGGTGGTGGACTGCAG
CAGGGTTCAGACGCCCTTAGCGTAACAAAACCAAAGGAGGTCGCACACCGAACTGTCGTC
CAACAACAACCGAAAAACGAGAAATTTACGATCCGCAAGGTGGCGCAAACGTGCTTGAGT
GAGACCAAG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[16-183] 9.57E-49
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[18-173] 6.4E-26
Pfam
Small_GTPase (IPR001806) - T[21-179] 2.7E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 47.647 % 173 2.61E-54
RB11B_HUMAN 47.059 % 171 1.45E-53
RAB25_HUMAN 41.04 % 155 3.21E-47