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  1. Transcript 'Phfumi.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S6842.g07524.02.t

Possible name(s)

RAB11A; RAB11B; RAB6A

Location

S6842 [4,971 / 7,430]

Sequences

Amino acid sequence

Length: 251

>Phfumi.CG.MTP2014.S6842.g07524.02.p
MSCDAFFRETPASPNNIIKLVVIGDSGAGKSQLVSRFVRDQFSEEPESTVGLDFAVKTVK
VGDKVIRVQIWDLAGKNMFRNLTSSYYREAAAALVVYDITKVRSFENASRWIKDLRCYSG
CDVTMLVGNKLDLRHQRSIPSADGIKLAKEQGAMFIETSAKDSTHVKKAFHRLMEQASDT
LAKKQQLEYGVQHGGGLQQGSDALSVTKPKEVAHRTVVQQQPKNEKFTIRKVAQTCLSET
KDVCGRMSCCF

Nucleotide sequence

Length: 753

>Phfumi.CG.MTP2014.S6842.g07524.02.t
ATGTCGTGCGACGCTTTCTTCCGTGAAACACCTGCGTCCCCGAACAACATCATAAAACTG
GTTGTAATTGGGGATTCGGGTGCGGGAAAGTCCCAACTTGTGTCTCGCTTCGTTCGCGAT
CAGTTCAGTGAAGAACCGGAATCGACAGTGGGTCTGGATTTCGCCGTGAAAACAGTGAAG
GTCGGCGACAAGGTCATTCGCGTGCAAATATGGGATTTGGCGGGAAAAAATATGTTCAGG
AACCTAACCTCCTCGTACTATCGTGAAGCAGCGGCGGCGTTGGTCGTTTATGACATCACA
AAGGTGCGCTCTTTCGAAAACGCGTCGCGGTGGATCAAAGACCTTCGGTGTTACAGCGGC
TGTGACGTCACAATGCTGGTTGGCAACAAACTCGACCTACGCCATCAGCGCTCGATCCCA
TCCGCGGACGGTATAAAACTGGCAAAAGAGCAGGGAGCCATGTTCATCGAAACATCGGCC
AAAGACTCGACGCACGTGAAGAAAGCGTTTCACCGCTTGATGGAGCAAGCGAGCGACACT
CTTGCGAAAAAACAGCAACTCGAATACGGAGTGCAACACGGTGGTGGACTGCAGCAGGGT
TCAGACGCCCTTAGCGTAACAAAACCAAAGGAGGTCGCACACCGAACTGTCGTCCAACAA
CAACCGAAAAACGAGAAATTTACGATCCGCAAGGTGGCGCAAACGTGCTTGAGTGAGACC
AAGGACGTATGCGGACGTATGTCATGTTGTTTC

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[14-181] 1.04E-48
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[16-171] 7.0E-26
Pfam
Small_GTPase (IPR001806) - T[19-177] 3.0E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 47.647 % 174 2.18E-54
RB11B_HUMAN 47.059 % 172 1.49E-53
RAB25_HUMAN 41.04 % 155 3.37E-47