- Transcript 'KH2012:KH.C7.441.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C7.211.v3....' >
- Transcript 'KH2012:KH.C2.64.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S7017.g07590.02.t
Possible name(s)
ABCB6; ABCB7; ABCB8
Gene model
Location
S7017 [1,874 / 3,890]
Amino acid sequence
Length: 672
>Phfumi.CG.MTP2014.S7017.g07590.02.p
TNMLSRLHSCRHRLKVCVRPALLVTSHHPIQNYNGNQIVHKQRFTLDSVRYNAMHGSVTG
VDQSLGVEPVSSRHILKFMLSYVWPKNNPPVRRRVAFSLSLLVAAKLANVQVPFLFKQVV
DTFGNAGLNLSTPENAVFTTGLCLIVAYGTARASAALFGELRDAVFAKVAQRSIRNIARN
LFTHLHDLDLTFHLSRQTGALSKAIDRGTRGINFVLRALVFNIVPTAFEVTLVSSLLWYK
CGGNFALVTLLTLSTYAAWTLGITAWRTKYRVQMNKADSKIGTIAVDSLINYETVKYFNN
EEHEIKRVLADYEDANLKTNMSLALLNFGQQFIFTSGLTGIMLLAAHGIKEGSLTVGDLV
LVNGLLFQLSVPLNFLGSVYRDIRQAVIDMQSMLSLMSTKQKIARDVIAPQLVLPKEKAS
ISFDNISFAYNPEKKIIDNMSFDVEPGQKVGIVGGSGSGKSTLVRLLYRFYDPDVGKISL
GGQDIKDLDVNSVRSLIGIVPQETVLFHDTIYHNIAYGDLTASEEQVHEAARMADIHDAI
MRMPLGYETQVGERGLKLSGGEKQRVAIARAILKNPTFLLYDEATSSLDSITEENILAAV
QRISKDKTSVFIAHRLSTVMDCDRIFVLDKGKVAEQGTHTQLLANQNSIYFNLWSSQHKA
VLENCEHDHNNN
Nucleotide sequence
Length: 2,016
>Phfumi.CG.MTP2014.S7017.g07590.02.t
ACAAACATGCTCTCACGGCTGCATAGTTGCCGCCATCGGCTTAAAGTGTGTGTAAGACCG
GCTCTGTTGGTGACATCACATCATCCAATTCAAAACTATAATGGCAATCAGATTGTGCAC
AAACAGAGGTTTACTCTTGATAGTGTTCGTTACAATGCTATGCACGGATCTGTAACAGGG
GTCGATCAGAGTTTGGGTGTTGAGCCAGTCAGCTCAAGACACATTTTAAAGTTTATGTTG
TCATATGTCTGGCCAAAAAACAACCCTCCAGTTCGGAGAAGAGTTGCATTTTCGCTTTCC
CTCTTGGTTGCGGCCAAGTTAGCAAATGTCCAGGTGCCTTTTCTCTTCAAACAAGTCGTT
GACACTTTCGGAAATGCAGGTCTTAATTTGTCTACACCAGAAAATGCAGTGTTTACCACT
GGTCTGTGTCTCATTGTTGCATATGGAACTGCTCGGGCAAGTGCAGCTTTGTTCGGTGAA
CTCCGAGATGCTGTGTTCGCAAAGGTTGCTCAACGCTCAATTCGCAACATTGCAAGGAAT
TTATTCACGCATTTACATGACCTTGATTTGACCTTTCATCTATCGAGGCAGACTGGTGCT
CTTTCAAAAGCAATTGATCGTGGGACTAGAGGAATTAACTTTGTACTGCGGGCCCTGGTG
TTTAATATTGTTCCCACTGCATTCGAGGTCACCTTGGTAAGTTCATTACTTTGGTACAAA
TGTGGGGGTAACTTTGCTTTGGTAACTCTGTTGACATTGTCAACTTATGCTGCCTGGACC
TTGGGCATAACTGCATGGCGCACAAAATATCGGGTACAAATGAACAAAGCAGACAGCAAA
ATTGGGACCATTGCAGTTGATTCGCTGATTAATTATGAAACTGTGAAATATTTCAACAAT
GAGGAACATGAGATTAAGAGGGTATTGGCAGATTATGAAGATGCAAACCTAAAAACCAAT
ATGTCCCTTGCCCTTCTAAACTTCGGACAACAGTTCATCTTTACATCTGGTTTGACTGGA
ATTATGCTACTTGCAGCTCATGGCATAAAGGAGGGAAGCCTGACAGTTGGAGACCTTGTT
CTTGTAAACGGGCTGTTGTTTCAGTTGTCAGTGCCTTTGAACTTTCTTGGGTCTGTGTAT
CGCGACATCCGACAGGCTGTGATCGATATGCAGTCCATGTTAAGCTTGATGAGCACCAAG
CAAAAAATTGCAAGAGACGTTATTGCACCCCAACTAGTTCTACCTAAAGAAAAAGCCTCC
ATCTCCTTCGACAACATTTCATTTGCCTACAACCCTGAGAAAAAGATAATTGACAATATG
AGTTTCGATGTTGAACCAGGCCAGAAAGTTGGAATCGTTGGTGGCAGTGGAAGTGGAAAG
TCAACTCTTGTAAGGTTACTGTACAGGTTCTATGACCCAGATGTGGGAAAAATCTCTTTG
GGAGGTCAAGACATAAAAGATTTGGATGTAAATAGTGTTCGAAGCCTGATTGGAATCGTT
CCTCAAGAAACTGTGTTATTCCATGACACAATTTATCACAACATTGCTTATGGGGACTTG
ACTGCATCAGAAGAACAAGTTCATGAGGCTGCCAGGATGGCTGATATCCACGACGCTATT
ATGAGAATGCCACTTGGATATGAAACACAAGTCGGTGAACGTGGCCTAAAATTGTCTGGC
GGAGAGAAGCAGAGAGTAGCCATTGCTCGGGCAATTCTGAAAAACCCAACATTCTTGCTT
TACGATGAGGCAACTTCATCACTCGACTCAATAACAGAAGAAAACATACTAGCAGCTGTA
CAGAGAATTTCTAAAGACAAGACCTCTGTATTTATTGCGCATCGTCTTTCAACCGTGATG
GACTGTGACAGAATATTTGTGCTTGACAAGGGAAAAGTTGCAGAACAGGGTACACACACA
CAACTGCTGGCAAATCAGAATTCCATCTACTTTAACTTGTGGTCTAGTCAGCACAAAGCT
GTCTTAGAAAATTGCGAGCATGATCACAATAATAAC
| Gene3D |
ABC1_TM_sf (IPR036640) - T[82-406] 8.2E-126 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[90-397] 2.22E-51 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[96-385] 36.621 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[97-372] 2.2E-31 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[413-657] 1.74E-87 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[421-655] 23.543 |
| Pfam |
ABC_transporter-like (IPR003439) - T[438-586] 5.6E-35 |
| SMART |
AAA+_ATPase (IPR003593) - T[446-626] 3.4E-15 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[558-572] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB8_HUMAN | 32.753 % | 238 | 6.39E-69 |
| ABCB6_HUMAN | 40.102 % | 428 | 1.42E-139 |
| ABCB7_HUMAN | 58.692 % | 747 | 0 |