- Transcript 'Phfumi.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S70.g00816.02.t
Possible name(s)
TBR1; TBX6; TBXT
Gene model
Location
S70 [19,932 / 22,246]
Amino acid sequence
Length: 519
>Phfumi.CG.MTP2014.S70.g00816.02.p
MAYSEVQYPSQHCAVRPQQFQSDMQYYQGVPSRFQAVNENKSWYPNEDHNANSNFHHENN
YQRLSPPGQALSTMWNPINQGQYLNMNVFNGKSAPPANNVNKYGQNDGYRQRINSAASDG
YAAPSSNQWMSAQSPNMYSPTNQFNFPRSRQGSMTDQGQLTPDNYYHTQQNYNNQCMPQH
MPYRATSTPGSCGTNSPPNMSIMPPQPTPTQMQQPSQVPTGEVPIPGKRGSDWELECMGV
EMKLSNANVWKNFDNVVTEMVISKHGRRMFPVLEYELNGLDPNKLYNVFLDFVLANCYVW
KYVDQGWHPNGLAANEEPDFQPGQRVYLHPDSPAPGDVWNKKGASFNKMKLSNHYHEKEK
IITLRTLHKYQPRLHIVEVDHVNPSMQSNLRTFVLPKTTFMTVTLYHDTDVAQLKINLNP
FARSFRDKSLTKKPSDDSNSSNSSSMSQSLSPMTSPENVENSVHDVGDNEPINFDANEIV
KVENPVNSVDLEKAKQFLHKQLNVMSQLVRTSEELERNS
Nucleotide sequence
Length: 1,557
>Phfumi.CG.MTP2014.S70.g00816.02.t
ATGGCTTATTCAGAAGTGCAGTACCCGTCGCAGCATTGTGCTGTGAGGCCGCAACAGTTT
CAGTCTGACATGCAATACTACCAAGGCGTACCTAGTCGATTTCAGGCTGTGAATGAAAAC
AAAAGCTGGTATCCCAATGAGGACCACAATGCCAACAGCAATTTTCATCACGAGAACAAC
TACCAAAGACTATCGCCTCCTGGCCAAGCGTTGTCCACAATGTGGAATCCTATTAACCAG
GGGCAGTATCTTAATATGAACGTGTTTAATGGAAAGAGTGCTCCGCCCGCAAACAATGTA
AATAAATACGGGCAAAATGACGGTTACCGCCAGCGCATTAACAGCGCCGCCAGTGATGGT
TATGCAGCACCTTCAAGCAACCAGTGGATGTCAGCACAAAGCCCAAACATGTATTCTCCG
ACGAATCAGTTTAATTTTCCAAGATCTCGTCAAGGAAGCATGACCGATCAAGGGCAGTTG
ACACCTGACAACTATTACCACACTCAGCAAAACTACAACAACCAGTGTATGCCGCAACAC
ATGCCGTACAGAGCTACATCCACCCCAGGTAGTTGTGGCACCAACTCTCCACCCAACATG
TCCATAATGCCACCACAGCCAACCCCAACACAAATGCAACAACCTTCACAGGTACCAACT
GGGGAAGTTCCCATCCCAGGAAAGCGCGGAAGTGATTGGGAATTGGAATGCATGGGAGTT
GAAATGAAGTTGTCCAATGCAAATGTGTGGAAGAACTTCGACAACGTGGTTACTGAGATG
GTGATCAGCAAACATGGAAGGCGTATGTTTCCGGTGTTGGAATACGAACTGAACGGACTG
GATCCAAACAAGCTTTATAACGTGTTTCTTGACTTTGTTCTTGCAAACTGTTACGTATGG
AAATATGTTGACCAAGGCTGGCATCCAAATGGACTTGCTGCAAATGAAGAACCCGATTTT
CAACCTGGACAACGAGTTTATTTGCACCCCGATTCACCCGCACCCGGCGATGTATGGAAT
AAGAAAGGGGCGAGTTTTAACAAGATGAAGCTAAGCAACCACTACCATGAAAAAGAAAAG
ATTATTACACTGAGAACTCTTCATAAGTATCAACCTCGTCTCCACATTGTTGAGGTGGAT
CACGTCAATCCATCCATGCAAAGTAATCTGCGAACATTTGTACTTCCTAAAACTACTTTC
ATGACAGTTACCTTGTATCACGATACCGACGTCGCACAGCTTAAAATTAATCTGAATCCA
TTTGCAAGGTCATTCAGAGACAAATCATTGACCAAAAAACCTTCTGACGACAGCAACTCG
TCGAATTCGTCGTCAATGTCGCAATCTCTTTCCCCAATGACTTCGCCAGAAAATGTGGAA
AATTCGGTGCATGACGTAGGCGATAACGAACCTATTAATTTTGACGCAAATGAAATCGTA
AAAGTGGAAAACCCTGTTAATTCTGTTGACCTCGAAAAAGCAAAGCAGTTTCTTCACAAA
CAACTGAACGTTATGTCGCAGTTGGTTCGAACGAGCGAAGAGTTGGAAAGAAATTCG
| PANTHER |
TF_T-box (IPR001699) - T[202-472] 2.6E-71 |
| Gene3D |
T-box_sf (IPR036960) - T[238-433] 1.4E-62 |
| SMART |
TF_T-box (IPR001699) - T[239-432] 5.9E-66 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[240-427] 1.62E-61 |
| Pfam |
TF_T-box (IPR001699) - T[243-427] 3.0E-58 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[244-427] 58.638 |
| PRINTS |
TF_T-box (IPR001699) - T[257-281] 1.4E-31 - T[327-340] 1.4E-31 - T[344-353] 1.4E-31 - T[363-377] 1.4E-31 - T[398-411] 1.4E-31 - T[419-427] 1.4E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRAC_HUMAN | 39.706 % | 160 | 9.05E-44 |
| TBX6_HUMAN | 35.065 % | 164 | 2.15E-45 |
| TBR1_HUMAN | 43.299 % | 169 | 1.95E-45 |