Aniseed - Transcript Card

Transcript 'Phfumi.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S71.g00822.03.t

Possible name(s)

CPXM1; EDIL3; RS1

Gene model

Phfumi.CG.MTP2014.S71.g00822

Location

S71 [625 / 1,165]

Sequences

Amino acid sequence

Length: 102

>Phfumi.CG.MTP2014.S71.g00822.03.p
AAGEWIEVDLLEPETITGVITQGRNQLDQWVTRYNIKYMRPHETAWQTVKDASGHDDLFY
GNSDSDTEVTNMFHRPIVAVKLRLVAQQWHNYISLRHEYLTC

Nucleotide sequence

Length: 309

>Phfumi.CG.MTP2014.S71.g00822.03.t
GCGGCTGGAGAATGGATTGAAGTCGACTTGCTAGAGCCTGAAACAATTACTGGGGTCATT
ACACAAGGAAGGAACCAGCTGGATCAATGGGTGACGCGGTATAATATCAAGTACATGCGG
CCACATGAAACTGCTTGGCAAACTGTCAAGGACGCTTCTGGCCACGATGATCTTTTCTAT
GGGAACAGCGACTCGGACACTGAAGTAACCAACATGTTTCATCGGCCGATAGTTGCAGTC
AAGCTTCGTCTTGTGGCCCAGCAGTGGCACAACTATATTTCGCTGCGCCACGAATACTTG
ACTTGCTAG

InterProScan

ProSiteProfiles	FA58C (IPR000421) - T[1-102] 25.979
Gene3D	Galactose-bd-like_sf (IPR008979) - T[1-102] 1.6E-31
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[3-102] 5.02E-27
CDD	FA58C (IPR000421) - T[4-98] 6.68481E-29
Pfam	FA58C (IPR000421) - T[4-98] 6.6E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
XLRS1_HUMAN	37.624 %	92.8	8.42E-25
CPXM1_HUMAN	39.048 %	73.2	1.32E-16