- Clone 'AHC0AAA5YF08' >
- Region 'REG00000385' >
- Transcript 'KH2012:KH.C2.141.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S21...' >
- Transcript 'Phfumi.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S7470.g07759.01.t
Possible name(s)
DDX58; DHX58; IFIH1
Gene model
Location
S7470 [552 / 5,854]
Amino acid sequence
Length: 490
>Phfumi.CG.MTP2014.S7470.g07759.01.p
VGLTASPGSGKSSTVQQGCKHVLKLLANLNVKIPPVQVKENLEELSAFTTNDNFVLEDFV
FKVPERRGRPEYENGVINFRDRSILIKDTELSQQFQIYANYLKVYNNALLINEHVRESDA
IKYIEDNLFRTFHDIEMKLKELFDKSEISKLATRTPGPLLQRLIEIIQHQFAVIPNSRCI
IFAQTRDIATSLVTCLCESEVLAKFDLNPDYLTGAGAKNSQGGLTKPLQDDKLKRFRDGK
SKVMIATSIADEGIDIKACNLVVTYNHCSNEIAQVQRKGRGRAKESKMFILAYRDRGFIE
KENINRDRNQLTNLTLEHLQTMDHKKLRLEVEAIQEKNCSAVAPTTSNQQRVGGIWKLSC
IGCKREVTSSDQFRMVKQHYVCIDEQFPLKPFKCPMKTITVSLEEHVCGKLLCGNATCRQ
EWGSLMIYKGLTIYVLAIRNFVLTNGKETMVKKFWKDAPFHVDKSFDDHIILDEVDVDMD
DDDDIYNFDF
Nucleotide sequence
Length: 1,470
>Phfumi.CG.MTP2014.S7470.g07759.01.t
GTTGGACTAACAGCATCGCCAGGCTCAGGAAAATCAAGCACTGTCCAACAAGGATGCAAA
CATGTTTTAAAACTCCTTGCAAATTTGAATGTTAAAATTCCCCCAGTTCAAGTGAAGGAA
AATCTTGAAGAGCTTTCAGCTTTTACAACAAACGACAATTTTGTGTTGGAAGATTTTGTT
TTCAAAGTTCCAGAACGTCGAGGCCGGCCTGAGTATGAAAATGGAGTAATTAATTTTAGA
GACAGAAGCATTTTAATTAAAGACACAGAGCTTTCCCAGCAGTTTCAGATTTATGCCAAC
TATCTCAAGGTTTACAACAATGCACTTTTGATAAATGAACATGTCCGTGAATCTGATGCC
ATCAAATACATTGAAGACAATTTGTTCAGAACTTTTCATGACATAGAAATGAAACTTAAA
GAATTGTTCGACAAAAGTGAAATCTCAAAATTGGCAACAAGAACCCCCGGTCCATTGCTA
CAGAGACTCATAGAAATCATCCAACATCAGTTCGCAGTCATTCCCAACTCTCGTTGCATA
ATCTTCGCACAGACAAGGGACATCGCGACATCGCTAGTGACTTGTCTGTGCGAATCAGAA
GTTTTGGCGAAATTTGATCTAAATCCCGATTATCTAACTGGAGCTGGGGCAAAAAACTCA
CAGGGAGGTCTAACCAAGCCACTGCAGGACGACAAACTCAAAAGATTTCGAGATGGAAAA
AGCAAAGTTATGATTGCGACTTCAATTGCTGACGAAGGAATTGACATTAAAGCGTGCAAC
CTTGTGGTTACGTACAACCATTGCAGCAACGAAATTGCGCAAGTACAAAGAAAAGGTCGT
GGTCGTGCCAAGGAAAGCAAAATGTTCATTCTTGCATACCGGGACCGGGGCTTCATCGAA
AAAGAGAATATCAATCGGGATAGAAATCAGCTGACCAATCTAACTCTTGAACATTTGCAG
ACCATGGATCACAAAAAACTCCGTTTAGAGGTTGAGGCAATACAAGAAAAAAATTGTAGT
GCTGTTGCTCCCACCACTAGTAATCAACAGAGAGTTGGTGGAATTTGGAAACTTTCATGC
ATTGGGTGCAAGCGGGAAGTGACATCATCGGATCAGTTCCGCATGGTTAAACAGCATTAT
GTTTGTATTGATGAGCAATTTCCACTCAAACCGTTTAAGTGTCCTATGAAGACAATAACT
GTGTCACTAGAAGAACACGTTTGTGGCAAGTTGCTGTGTGGAAATGCTACTTGCAGGCAG
GAATGGGGGTCTCTGATGATCTACAAGGGTCTCACAATTTATGTGTTGGCAATTAGAAAT
TTTGTGCTGACTAATGGCAAAGAAACCATGGTTAAAAAATTTTGGAAAGATGCCCCATTC
CATGTGGATAAATCTTTTGATGATCACATTATCCTGGATGAGGTGGATGTGGATATGGAT
GATGATGATGATATCTATAATTTTGATTTT
| CDD |
Helicase_C (IPR001650) - T[147-287] 2.05941E-12 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[159-294] 2.22E-21 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[159-335] 14.348 |
| Pfam |
Helicase_C (IPR001650) - T[173-283] 1.3E-15 |
| SMART |
Helicase_C (IPR001650) - T[196-284] 1.3E-12 |
| ProSiteProfiles |
RLR_CTR (IPR021673) - T[346-472] 22.322 |
| Gene3D |
RLR_C_sf (IPR038557) - T[347-486] 2.6E-21 |
| Pfam |
RLR_CTR (IPR021673) - T[356-464] 3.3E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX58_HUMAN | 30.326 % | 184 | 3.21E-51 |
| DDX58_HUMAN | 28.788 % | 179 | 8.66E-49 |
| IFIH1_HUMAN | 27.392 % | 167 | 1.36E-44 |