- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Boleac.CG.SB_v3.S979...' >
- Transcript 'KH2012:KH.C6.80.v2.A...' >
- Transcript 'Phfumi.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S7786.g07892.01.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S7786 [1,097 / 5,791]
Amino acid sequence
Length: 332
>Phfumi.CG.MTP2014.S7786.g07892.01.p
DEVDGMSVDTATAIAEFDFLNPDAEEPDDAKATDWTIDQNKLNAMKQQFRLEKKQQKKKG
MKRPAKKHLQDMLQTFQGAEMQKANDDIDIHIPEEENLPFTVGGGQTGDESIETALGLGA
LAGLTVANEADPLAYDMSATKETFRKTWNPKFTLRSHFDGIRAVRFLPTESAVLTASEDN
TMKLWNLNKPLPNKKSQALDVEPIYSFRGHVGAVLCLDVSADGVFCFSGGIDSSVRCWAL
PNINIDAYDTYGLSTPTCVEFVQCDSNHAVVSHTDGKVVVYDLETGKVPVILSESDTGRV
NAVATHPTMPITMTAHDDRHIKFFDNSSGKKA
Nucleotide sequence
Length: 996
>Phfumi.CG.MTP2014.S7786.g07892.01.t
GATGAGGTTGACGGAATGAGCGTTGATACTGCAACAGCAATTGCTGAGTTTGACTTCTTG
AATCCAGATGCTGAAGAACCAGATGATGCAAAAGCCACAGACTGGACAATTGATCAGAAT
AAATTGAATGCAATGAAACAACAGTTTCGGTTGGAGAAAAAACAGCAGAAAAAGAAGGGA
ATGAAACGACCAGCAAAGAAACACTTGCAAGACATGTTACAGACCTTCCAGGGAGCTGAG
ATGCAGAAAGCTAATGATGACATTGATATTCACATACCTGAAGAAGAGAACCTGCCATTC
ACTGTGGGAGGGGGACAGACTGGAGATGAATCAATTGAAACTGCTCTTGGGCTTGGAGCT
CTAGCTGGACTCACTGTAGCTAATGAAGCTGACCCTCTTGCATACGATATGTCAGCGACC
AAGGAGACCTTTAGAAAAACCTGGAATCCGAAATTCACACTCCGGAGCCACTTTGATGGG
ATCCGGGCAGTCCGGTTTCTTCCCACGGAGTCGGCAGTTCTCACCGCGTCCGAAGACAAC
ACAATGAAGTTGTGGAATTTAAACAAACCTCTTCCCAACAAGAAGAGCCAGGCTTTAGAT
GTTGAGCCGATCTACAGCTTCCGTGGACATGTAGGAGCAGTTTTGTGTCTTGATGTGAGT
GCGGATGGAGTTTTCTGCTTCAGTGGAGGAATTGATTCGTCAGTAAGATGTTGGGCGCTT
CCTAATATCAATATTGATGCCTACGACACATATGGTTTATCGACGCCCACTTGTGTTGAG
TTTGTGCAATGCGACTCTAACCACGCGGTGGTGTCCCACACCGACGGGAAAGTTGTTGTA
TATGATCTTGAAACTGGAAAAGTACCTGTCATTCTGTCTGAGAGCGACACAGGTCGAGTG
AACGCAGTCGCAACCCACCCAACCATGCCTATCACCATGACAGCACACGATGATCGCCAC
ATCAAGTTTTTTGATAATTCTTCAGGTAAAAAGGCA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[135-332] 2.2E-31 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[146-330] 6.72E-32 |
| SMART |
WD40_repeat (IPR001680) - T[147-186] 1.9E-6 - T[200-239] 1.1E-6 - T[244-282] 120.0 - T[285-325] 1.1 |
| Pfam |
WD40_repeat (IPR001680) - T[148-186] 8.6E-4 - T[202-238] 2.1E-5 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[154-332] 20.224 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[154-188] 13.416 - T[207-238] 10.208 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[173-187] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 37.53 % | 263 | 1.82E-81 |
| STRN_HUMAN | 36.682 % | 262 | 1.8E-81 |
| STRN4_HUMAN | 38.966 % | 201 | 1.16E-58 |