Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S786.g02745.01.t

Possible name(s)

NLRC3; NLRP12; RNH1

Location

S786 [9,995 / 14,738]

Sequences

Amino acid sequence

Length: 272

>Phfumi.CG.MTP2014.S786.g02745.01.p
LKKLDLSFNKIGDSGTASLARCVHNIEELELGGCEAESEGADKLSSKIQVLEKPLKKLDL
SENKIGDKGASSLGCCLHNTERLILKECGIKTKGVDDLSEKIRALENPMKQLDLSHNKIG
DLEATSLANCIHNFEELVLIGCEIGRQGAENLSNEIKTLRKPLKKLDLSYNKIGDLGATS
LAHGVHNIEELVLRGCEIRSKGMIQLSKKMLLLQVPMKKLDLSRNMIGDFGATLLANCIH
YIEELELDGCEIGNKGVKEIAKRIQVLHQPVK

Nucleotide sequence

Length: 816

>Phfumi.CG.MTP2014.S786.g02745.01.t
CTGAAGAAACTGGACCTGTCCTTTAACAAGATCGGCGATTCGGGCACAGCTTCTCTTGCT
CGCTGCGTCCACAACATCGAGGAGCTGGAGCTTGGCGGATGCGAAGCAGAAAGCGAAGGA
GCCGACAAACTTTCCAGCAAGATCCAAGTCCTGGAAAAACCCTTGAAGAAACTCGACCTC
TCCGAAAACAAGATCGGAGACAAGGGAGCGTCGTCGTTGGGTTGCTGCCTCCACAACACT
GAACGACTGATCCTGAAAGAATGCGGGATCAAAACTAAGGGTGTCGACGACCTCTCTGAG
AAGATCAGGGCCTTGGAAAATCCAATGAAACAGCTCGATCTTTCACACAACAAGATCGGA
GACTTGGAAGCGACCTCGCTTGCAAATTGCATCCACAACTTCGAGGAACTTGTTCTGATT
GGATGCGAGATCGGACGACAAGGAGCCGAAAATCTCTCGAACGAGATCAAGACTTTGCGA
AAACCCCTGAAGAAACTGGATCTCTCCTACAACAAGATAGGAGATCTTGGCGCGACGTCG
CTGGCCCACGGTGTCCACAACATCGAAGAGCTTGTGCTTCGTGGTTGCGAGATTCGAAGC
AAAGGAATGATCCAGCTTTCCAAGAAGATGCTTCTTCTGCAAGTCCCCATGAAGAAGCTC
GACCTCTCCCGCAACATGATCGGGGACTTTGGAGCCACGTTGCTCGCTAACTGCATCCAC
TACATCGAGGAGCTGGAGCTGGATGGATGTGAGATCGGCAACAAGGGAGTGAAGGAAATC
GCCAAGAGGATACAAGTTCTTCACCAGCCGGTAAAG

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[1-270] 2.4E-53
Pfam
Leu-rich_rpt (IPR001611) - T[1-20] 0.0013 - T[55-73] 6.2E-5 - T[109-121] 0.089 - T[163-182] 6.9E-5 - T[187-207] 0.9 - T[217-236] 0.38 - T[241-261] 0.029

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value