- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phfumi.CG.MTP2014.S9...' >
- Transcript 'Moocci.CG.ELv1_2.S36...' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Phfumi.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S7.g00143.01.t
Possible name(s)
CALM3; TNNC1; TNNC2
Gene model
Location
S7 [16,173 / 17,634]
Amino acid sequence
Length: 161
>Phfumi.CG.MTP2014.S7.g00143.01.p
SLPDQLKDECTAAFEIFTNESPDGKLGPDDLGKVLRMLGQSPSDDEVAEIIKDFAEGDNL
ALDEFLDFMARQLNGNQDKREEDLSNSFKTLLKETFRWYDKDGDGIISWDELKIALQSTG
EKVEDWEVEELMREGDENADKRIDFDEWINMMKELDGHISC
Nucleotide sequence
Length: 486
>Phfumi.CG.MTP2014.S7.g00143.01.t
TCTCTTCCAGACCAGCTCAAGGACGAATGCACGGCCGCTTTTGAGATTTTCACCAACGAG
AGCCCGGATGGAAAACTCGGCCCTGATGACCTCGGAAAAGTGCTGAGAATGTTGGGACAG
AGCCCAAGTGATGATGAGGTGGCTGAGATCATAAAAGACTTTGCCGAAGGCGACAACCTT
GCCTTGGACGAGTTCCTTGATTTCATGGCAAGACAACTCAACGGAAACCAAGATAAACGT
GAAGAAGATTTGAGCAACAGCTTTAAGACTTTGTTGAAGGAAACATTCCGTTGGTACGAC
AAGGACGGCGATGGCATCATCAGCTGGGATGAACTGAAAATCGCGCTACAGAGCACTGGC
GAAAAGGTCGAGGATTGGGAAGTCGAGGAACTGATGCGCGAAGGCGACGAAAACGCCGAC
AAGAGAATTGATTTCGACGAATGGATAAACATGATGAAAGAGCTTGACGGACATATTTCC
TGCTAA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[4-158] 8.81E-33 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[23-41] 6.173 - T[87-122] 13.035 - T[127-158] 10.385 |
| SMART |
EF_hand_dom (IPR002048) - T[91-119] 0.017 - T[127-155] 2.1E-4 |
| Pfam |
EF_hand_dom (IPR002048) - T[92-153] 1.0E-10 |
| CDD |
EF_hand_dom (IPR002048) - T[92-153] 4.54885E-15 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[100-112] . - T[136-148] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 36.306 % | 92.8 | 1.18E-24 |
| TNNC1_HUMAN | 42.949 % | 114 | 6.25E-33 |
| TNNC2_HUMAN | 38.312 % | 96.7 | 5.04E-26 |